Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0318 ATGGAGAACAACAATCAGCAATCCTTTTGGCAATTCAGTGATCAGCTCCGTGTGCAACAAACTTCCAATCTGGCCAACCTTTCTCTGAATGATTCCATTTGGAGCAACAGCAGCAGCAACATGAACAACAATTTCATGCCCACCAAGAGTGAAAGGAGGAACTTTGACATCAGGGTCGGTGGTGATATCAATTCAAAAGAGCCTGCTTCTGATTTCAATGATGGCTGGAAGCAAATGATGAATAGCACCCCTAATGGTTCTCTCTACAATTACAACCCTCTAATTGGTGGTGGTGGAGCAGGTCTTAATGGAGGGTTCAACAAGGGGATTTATGATTCCAAGCCTATGTATGCTATTGCTAACAACAACAACTTGAACAACATCAATCTCAAAGGGAACAACAAGGTTGGTGGTGAAGATGAGTTTCTGTTTTCTCACCCACATAAAAATTTCAAGAAGAACACCAACCCTAACAAGAAGCAAGGGGAAAGCAACAACAACAACAACAACAATGATAGCAACAACAAGAGCAAGGATGCCAAGAAGTTTAAAACCCTGCCAGCATCAGAGTCTCTGCCTAGGAATGAAACAATTGGAGGCTACATCTTTGTTTGCAACAATGATACCATGGCAGAGAACCTCAAAAGGCAACTATTTGGTCTTCCTCCAAGGTACAGGGATTCAGTTCGGGCCATTACTCCAGGGTTGCCCCTATTTCTTTACAACTATTCCACTCACCAACTCCATGGAATCTTTGAGGCTGCAAGTTTTGGAGGAACTAACATTGATCCATCTGCCTGGGAAGACAAGAAGTGCCCTGGTGAATCTCGTTTCCCTGCTCAGGTACAAGTGCTTACTAGGAAAGTTTGTGAGCCACTTGAGGAGGATTCCTTCAGGCCCATCCTTCACCACTATGATGGCCCCAAGTTCCGTCTTGAGCTGAACGTGCCCGAGGCATTGTCTCTTCTGGACATTTTTGCAGAACAAGATACTTTCAATGACACTTTCAAGGAATTTACAGCATAA 1026 0.4386 MENNNQQSFWQFSDQLRVQQTSNLANLSLNDSIWSNSSSNMNNNFMPTKSERRNFDIRVGGDINSKEPASDFNDGWKQMMNSTPNGSLYNYNPLIGGGGAGLNGGFNKGIYDSKPMYAIANNNNLNNINLKGNNKVGGEDEFLFSHPHKNFKKNTNPNKKQGESNNNNNNNDSNNKSKDAKKFKTLPASESLPRNETIGGYIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASFGGTNIDPSAWEDKKCPGESRFPAQVQVLTRKVCEPLEEDSFRPILHHYDGPKFRLELNVPEALSLLDIFAEQDTFNDTFKEFTA* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0318 341 ProSiteProfiles DCD domain profile. 196 328 IPR013989 -
Lja4g0318 341 MobiDBLite consensus disorder prediction 139 191 - -
Lja4g0318 341 SMART dcd 196 328 IPR013989 -
Lja4g0318 341 MobiDBLite consensus disorder prediction 157 174 - -
Lja4g0318 341 Pfam Development and cell death domain 199 326 IPR013989 -
Lja4g0318 341 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 134 340 - -
Lja4g0318 341 PANTHER DCD (DEVELOPMENT AND CELL DEATH) DOMAIN PROTEIN 5 71 - -
Lja4g0318 341 PANTHER - 134 340 IPR044832 GO:0034976
Lja4g0318 341 PANTHER - 5 71 IPR044832 GO:0034976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0318 Lja-Chr4 2571214 2574330 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0318 - - lja:Lj4g3v3014280.1 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0318 4 2571214 2574330 Lja4g0318 4 2571214 2574330 ECH