Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0314 ATGGCATCAACTTCCCTCAATTCAATCCCTCTTACATCTTCTTCCCTTAACATTCCTCATTGCTACTCCATTCCCTCCTCTACCTTCTTCTCTTCTCCAATCCGCGCATTCAAACCTCTGTTTGCTGAATCAAAATCCCACTGTTACCAGAAGAAAAACGATTCTGTCTTCTCTGTCAAAGCCCAAACCCTAGACTTCACTGATTCATTCTTCGAAGGTGGATTAGGGTCGGAAGATGACCTGAATTCTTCCGGAACTGGTCTTACTGCTACTGAGGAGAAGGAGGAACCGCAATGCCCACCCGGACTTAGGCAGTACGAAACAATGGCGGTTTTGAGACCTGATATGTCTGAGGATGAGCGACTCGCACTCACCCAGAAGTACGAGGAGCTGCTTGTTGCTGGAGGTGGCATGTATGTAGAGGTTTTTAACAGAGGAGTTATTCCACTAGCATATAGCATCAAGAAGAAAAACAAGGCAGGAGAGACCAACACATATTTGGATGGAATCTACCTTCTATACACCTACTTCACTAAGCCCGAATCTATAGTCGCTCTTGAGGAGACACTCTTGGCGGACGATGATGTTCTGCGATCAACGACCTTCAAAATCAAGAAAAGGAAGTATTAG 630 0.454 MASTSLNSIPLTSSSLNIPHCYSIPSSTFFSSPIRAFKPLFAESKSHCYQKKNDSVFSVKAQTLDFTDSFFEGGLGSEDDLNSSGTGLTATEEKEEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLYTYFTKPESIVALEETLLADDDVLRSTTFKIKKRKY* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0314 209 MobiDBLite consensus disorder prediction 77 101 - -
Lja4g0314 209 PANTHER 30S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTIC 24 209 - -
Lja4g0314 209 CDD bS6_chloro_cyano 103 204 - -
Lja4g0314 209 SUPERFAMILY Ribosomal protein S6 103 207 IPR035980 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lja4g0314 209 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 24 209 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lja4g0314 209 Gene3D - 102 209 IPR014717 -
Lja4g0314 209 Pfam Ribosomal protein S6 105 203 IPR000529 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Lja4g0314 209 Hamap 30S ribosomal protein S6 [rpsF]. 103 206 IPR020814 GO:0003735|GO:0005840|GO:0006412|GO:0019843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0314 K02990 - gmx:100305490 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0314 4 2551216 2553342 Lja4g0314 4 2551216 2553342 ECH