Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0313 ATGAAAGTTGAGGATTCGAAACGATGGACGGTGACATACACGAAGCAAATCAAGCAGAAACGCAAGGTTTACCAGGATGGATTTCTAGAGCTTCACATTCCCACCACCAAGGTGAAGCTGTTTGATGAGTGCGAGAAGCTGTTGACGTGTAGGCTCTTGAAGAATGACGAATCGGTTACCTCTGGTGAGACTATGGAGTTCAATGGTTACCTTGTTGACATCGGTGATCCTGAGGGAGGTAACTACAAGACTGGATCTGATTTGAATGTTGATATAAAACACAAGAATGCTTCGAGATTCAAAACACCTTGTGTAGGTATCAAAATGAATGGAAAGGAGAATATCGCACGGGCGCAGAAGCCTCTCAGTCCATCACGAAAAATCATCAAAGAATTCAAGAAGAGGGAACTGCTGAAGTATGTATCACCGAAGGTCAGTCAGGATACACCTAAACCTAGTACAAAAGAGTGGCAAGTTCTATACACAAAACACATGACTCAGAAGGCAAAGAAGTACCATGACGGTTTTTTACGACTAGTTATTTGTGGATCTCAGGGGGCACAGGTTAAGCTGTTTGATTCAAGTAGGAATCTCTTAGATAGTAGGTTCCTTAAGAAAGATGAAACAATAATATCTGGTGAATCGATTGCATTTGATGCACATTTGGTTGACATTGGTGAGGATCAAGGAAGTAATACACCAGATTCCTGTGTTCAAGGAGTCAACTGTAGTAATGCGGAGAGAGTGGGGAAGATGGAAAGAAAACAAACTTCTCTTGACACTGATGCCCATGTAAATGTTGGGAAAAGTGAGTGGCGGGTCCTATACACAACACAGTTAACCCAAAAAGCCAAGAAGTATCACGATGGCTTTTTACAACTAGAACTTTGTGGATCCCTCGGGAGGCAGGTTGTTCTTTGTGATATCAGTAAAAGGCCTTTAGAACGCAGGTTCCTAAAGAAAGATGAAGTTATAAAAGTTGGTGAATCAGTACATTTTGGTGGGCATTTAGTGAATGTTGAAGAACCTGAAGGAAGTCAACAATGTCCAGTGAAGTTGAATGACCGAGGGATTGGTAATAATGTTGTTGAGAGGAGACAACTAAGACAAGTACAAAATGGCTGTCACAAGGTCAATCCATCATTTGCTGTTAATCCATCTGTGATAAATATTGAAGAACCTGAAGGAAGACAACCGGCGAAAAGACCTTGTCTCGGGCAAGATGCAGGGTTGAACTCTCTCTTTGCTAGGATAGAAGAGATAAAATCTAATGGGGTAGTCCCACCAATCAAGCCTTTCCGTGATGCCAGTCAAATATTATCGATTTTACAAGATCCTAAGCATCAGGAAAGTTATGGCACAGGTGCCCAATCGTCCAATGGGTCAAGAGAAAGTGGTATGGTTAGGGAATCAACTGAGACTGTAGAAACCCACAACATTATGTCTTCCAAAGAAGCATGTGGTGGTGGTGGTTTCCAGTTCACCGAGAATGTCAATATGTCTCACCAGGTCCACTCAGACAAGGAAGCTCAAACACATATAAGCGAGGCAGATTTTGATTTACTCATATCAAGTTCTGGTGATCATTCTCACTGCCTGATTTCTAATGAAGAGATGAGTGATGAGGAGTTCTCGTGTAAAAGTGATGCATTCCCAAGCTTTGATCTTGGATTTTAA 1677 0.418 MKVEDSKRWTVTYTKQIKQKRKVYQDGFLELHIPTTKVKLFDECEKLLTCRLLKNDESVTSGETMEFNGYLVDIGDPEGGNYKTGSDLNVDIKHKNASRFKTPCVGIKMNGKENIARAQKPLSPSRKIIKEFKKRELLKYVSPKVSQDTPKPSTKEWQVLYTKHMTQKAKKYHDGFLRLVICGSQGAQVKLFDSSRNLLDSRFLKKDETIISGESIAFDAHLVDIGEDQGSNTPDSCVQGVNCSNAERVGKMERKQTSLDTDAHVNVGKSEWRVLYTTQLTQKAKKYHDGFLQLELCGSLGRQVVLCDISKRPLERRFLKKDEVIKVGESVHFGGHLVNVEEPEGSQQCPVKLNDRGIGNNVVERRQLRQVQNGCHKVNPSFAVNPSVINIEEPEGRQPAKRPCLGQDAGLNSLFARIEEIKSNGVVPPIKPFRDASQILSILQDPKHQESYGTGAQSSNGSRESGMVRESTETVETHNIMSSKEACGGGGFQFTENVNMSHQVHSDKEAQTHISEADFDLLISSSGDHSHCLISNEEMSDEEFSCKSDAFPSFDLGF* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0313 558 MobiDBLite consensus disorder prediction 446 472 - -
Lja4g0313 558 Pfam Protein of unknown function (DUF2439) 7 78 IPR018838 -
Lja4g0313 558 Pfam Protein of unknown function (DUF2439) 271 347 IPR018838 -
Lja4g0313 558 Pfam Protein of unknown function (DUF2439) 155 230 IPR018838 -
Lja4g0313 558 PANTHER ZINC FINGER GRF-TYPE CONTAINING 1 243 377 - -
Lja4g0313 558 PANTHER ZINC FINGER GRF-TYPE CONTAINING 1 4 234 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0313 - - lja:Lj4g3v3014350.3 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0313 4 2543985 2549465 Lja4g0313 4 2543985 2549465 ECH