Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0311 ATGACTGCAGCAACAACAGATGATATTGCTCGAATAGTAGTTGGTATCATAGGAAACATCATCTCAGGCTTCTTGTTCTTGTCCCCAGTGCCAACTTTTATCCAAATATGGAAGAAAAAATCAGTGGAAGAGTTCTCGCCAGCACCATACCTAGCCACGTTGGTGAACTGCATGGTTTGGACCTTGTACGGTCTACCCATGGTACATCCACACAGCGTGCTGGTCATAACAATCAACAGCTCAGGCTGCGCCATTGAGATCATATATGTCACACTCTTCTTGATCTATTCTGACCACAACAAGAGGCTCAAGGCGGTACTGTGGCTCATGGCAGAACTCATTTTCATCGCGGCTTTTGCCACTGTCACATTAACTACAGTCCACACCCACGAGAAACGCTCTGCCATTGTTGGAACCACATGCATCATCTTCAACATTATGATGTATGCTTCACCCTTAGCTGTCATGAAACTAGTGATTATGACCAAAAGTGTTAAGTACATGCCGTTATTCATATCTCTTGCCTCTTTTGGCAATGGTGTGGCTTGGACCACTTATGCTCTCATTCGTTTCGACCTATTCATCATGGTCCCAAATGCGCTTGGAACCTTGTTTTCGGTGGCACAACTGATTCTATATGCCACCTTTTACAAGTCGACAAAGCGGCAGCTAGCGGCAAGGAAAGCAGCCAAGGCGGAGGTGGATCTATCGCAGGTGGTTGTTGGTAATGGTGACCAACGATCCAAACCAAATAATTGA 759 0.4559 MTAATTDDIARIVVGIIGNIISGFLFLSPVPTFIQIWKKKSVEEFSPAPYLATLVNCMVWTLYGLPMVHPHSVLVITINSSGCAIEIIYVTLFLIYSDHNKRLKAVLWLMAELIFIAAFATVTLTTVHTHEKRSAIVGTTCIIFNIMMYASPLAVMKLVIMTKSVKYMPLFISLASFGNGVAWTTYALIRFDLFIMVPNALGTLFSVAQLILYATFYKSTKRQLAARKAAKAEVDLSQVVVGNGDQRSKPNN* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0311 252 Gene3D - 132 222 - -
Lja4g0311 252 Gene3D - 11 102 - -
Lja4g0311 252 Pfam Sugar efflux transporter for intercellular exchange 136 220 IPR004316 GO:0016021
Lja4g0311 252 Pfam Sugar efflux transporter for intercellular exchange 13 99 IPR004316 GO:0016021
Lja4g0311 252 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 8 248 - -
Lja4g0311 252 PANTHER RAG1-ACTIVATING PROTEIN 1 8 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0311 Lja-Chr4 2532927 2536627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0311 8 252 Miscellaneous Gene Families AT4G10850 53.785 1.04e-92 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0311 K15382 - gmx:100802303 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0311 4 2532927 2536627 Lja4g0311 4 2532927 2536627 ECH