Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0164 ATGCAACGCGTTGTTGACAACGTCCTCGCCGTCACTAAAGAGTCGGTGAAGACCTTTACTTATGAGTCGTTGAACAATATTGTGAGGTTGATCAATGGAGTTTCAGCTCTTTTGTTGACATTGTTACCTGGTAAAGCTACTATACTTGAAGGCATTCAGGGTTGGGAGCTCAGACCTACTTTCCGTGGACCGCGATTTCCTCGTTGGATGGAAAATGGTGTATCTTCTTTCAACCACTTTATTCATGAGCTTGCTGTGGATTCGGATACTTCAAGCCTCGAATACTCATCTGGAGAAGAAGATATGGACGGGTGTGAATATCTTTCATCTCCCTCGTCTCAGGGTTCTAGGGCCTCTAGAGATAGTTTTGCAGATTACGGTAGGCGTCAGGTAGATTGGATCCAGTATATCTTACTCTGGATTTGGGTTCCTATCAAGTTTTTGCTGGGGATTCCTTTTTATCTTTTCCAGTTAGTTTGTTCTGGAGTGTCAAGGCCAATTTCTATCTCTGGAAATCAGAACTCTTCACAAGAACATTCAAATAACAGAGTCCAAAGCCTCAAGGACCAAATTATCCATCGCGCTACTGATAGGAGACGTGGTATCATAGAGGATCTTAATTTAGGCATAGAGATATGTATAGAAGCCGTGTTTGATATGGTTCACAAGGCAGTACATCTTCTTCTTTCCCCATCAGAAGCTTTTGCTGCATTACATAGGTTGTTTTCATCTCATGAAAGAAGTGTCATAGATGATAATGATGGTGCTGAGGATGCCTCCATTTCTACAGCTACACTTGGAGAGAATGACCCAACACCTACAGAGAGGAATACCAATTATCGCCAGTCCTTGAACACAGATGCCCGTACATGTCAGGATGTCATAACAGAACTTGGGTATCCATACGAAGCTATTCATGTGATCACTAATGATGGATATGTTCTTCTTTTAGAAAGAATACCTAGGCGAGATGCTAGAAAGGCTGTTTATCTTCAGCATGGAGTTATGGATTCATCAATGGGTTGGGTGTCGAACGGTGTTGTTGGCTCTCCAGCTTTTGCAGCCTATGATCAAGGGTATGATGTGTTTCTGGGAAACTTGCGCGGTTTGGTTTCTAGGGAACATATCAACAAGAACATATCCTCACGTGAGTACTGGCGGTACTCCATCAATGAACATGGAACTGAGGATATCCCTGCTATGATAGAGAAAATCCATCAAGTAAAAACTGCTGAGTTGAGGCTTAGTAAACCCGACATCGAGGAGGATAACAATGATGATCAGCTTTACAAGCTTTGTGCAATTTCCCATAGTTTGGGAGGGGCATCTGTGTTGATGTATGTCATCACGCGTAGGATAGAAAGGAAACGCCATAGACTTTCTAGATTGATTTTGTTATCACCTGCTGGTTTTCATCAAGACTCTAACCTGGTTTTCTCTGTGGTTGAGCATGTAGTATTTTTGCTGGCTCCTATTCTTTCTCGTATTTGCCCCGCCTTCTATATTCCGACCCGGTTTTTCCGAATGCTTGTTAACAAGTTAGCTAGGGACCTGCAAAACCTGCCTGCAGTTGGAGGTTTGGTTCAAACCTTAGTGAGTTATGTTGTTGGTGGGGACAGTTCAAATTGGGTTGGAGCATTAGGATTACCTCATTACAACATGAATGATATGCCAGGAGTGTCATTCTATGTTGCTCTTCATCTTGCACAGATAAAGAGAACCAGAAGATTCAGAATGTTCGATTATGGGAGTGCTTCTGCTAACATGGAGGTGTATGGTTCACCTGAGCCTTTGGACTTGGCTGAAAACTACAGGCTCATTGACGTTCCTGTTGATCTTGTTGCTGGCCAGAAAGACAAGGTGATAAGGCCTTCAATGGTGAAGAGACACTATAAACTGATGAAGGAAGCTGGTGTGGATGTTTCATTCAATGAGTTTGAATATGCTCATTTGGATTTCACCTTCTCCCACCGTGAAGAACTTTTGTCATATGTTATGTCACGTTTGCTGCTTGTGGAGCCAAATTCAAAGTATCAACTAAATCAAAGGGGTGTAAGATTGAGGAAGAAAGTGCAGGCTTCAGTTAATGGGTAG 2094 0.426 MQRVVDNVLAVTKESVKTFTYESLNNIVRLINGVSALLLTLLPGKATILEGIQGWELRPTFRGPRFPRWMENGVSSFNHFIHELAVDSDTSSLEYSSGEEDMDGCEYLSSPSSQGSRASRDSFADYGRRQVDWIQYILLWIWVPIKFLLGIPFYLFQLVCSGVSRPISISGNQNSSQEHSNNRVQSLKDQIIHRATDRRRGIIEDLNLGIEICIEAVFDMVHKAVHLLLSPSEAFAALHRLFSSHERSVIDDNDGAEDASISTATLGENDPTPTERNTNYRQSLNTDARTCQDVITELGYPYEAIHVITNDGYVLLLERIPRRDARKAVYLQHGVMDSSMGWVSNGVVGSPAFAAYDQGYDVFLGNLRGLVSREHINKNISSREYWRYSINEHGTEDIPAMIEKIHQVKTAELRLSKPDIEEDNNDDQLYKLCAISHSLGGASVLMYVITRRIERKRHRLSRLILLSPAGFHQDSNLVFSVVEHVVFLLAPILSRICPAFYIPTRFFRMLVNKLARDLQNLPAVGGLVQTLVSYVVGGDSSNWVGALGLPHYNMNDMPGVSFYVALHLAQIKRTRRFRMFDYGSASANMEVYGSPEPLDLAENYRLIDVPVDLVAGQKDKVIRPSMVKRHYKLMKEAGVDVSFNEFEYAHLDFTFSHREELLSYVMSRLLLVEPNSKYQLNQRGVRLRKKVQASVNG* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0164 697 PANTHER LYSOSOMAL ACID LIPASE-RELATED 8 679 - -
Lja4g0164 697 Gene3D alpha/beta hydrolase 278 670 IPR029058 -
Lja4g0164 697 Pfam Partial alpha/beta-hydrolase lipase region 292 346 IPR006693 GO:0006629
Lja4g0164 697 SUPERFAMILY alpha/beta-Hydrolases 289 666 IPR029058 -
Lja4g0164 697 MobiDBLite consensus disorder prediction 93 119 - -
Lja4g0164 697 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 8 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0164 Lja-Chr4 1274650 1279275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0164 1 675 Lipid Metabolism Gene Families AT1G18460 69.809 0.0 934
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0164 - - gmx:100779931 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0164 4 1274650 1279275 Lja4g0164 4 1274650 1279275 ECH
Lja4g0164 4 1274650 1279275 Lja2g2064 2 22689826 22695372 PCT