Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0157 ATGGAGGCTCCACAAGGAGGATCAGAGAGGGACAAACCTACCTCTCCGATCACCGTCGTCTCCGCATTCTGGAAAGATTTTGACTTGGAGAAGGAGAAATCCATATTGGATGAACAAGGACTTCGAATTGCAGAGAACCAGGAAAACAGTCAGAAAAATAGGCGGAAGCTTGCAGAGAGCACCAGAAATTTCAAGAAAGCTTCACCGGAGGATAAGTTGAATTTGTTTAATACCTTGCTTAGGGGGTATCAGGAAGAGGTTGATAATCTTACGAAGAGAGCAAAGTTTGGAGAAAACGCTTTCCTCAACATCTATCAAAAGCTCTATGAAGCCCCAGATCCTTATCCAGCTCTTGCCTCAATTGCTGAGCAAGATCTCAAGTTGTCTGAGCTCGAATCTGAAAACCGAAAAATGAAAGTTGAGCTTGAGGAGTTTAGAACAGAGGCAACTCACTTGAAGAATCAGCAGGCTACGATACGAAGACTTGAAGAACGAAGTAGGCAGTTAGAGCTGCAGATGGAAGAGAAAGTAAAAGAAATTGTGGAGATTAAGCAGCGCAATCTGGCAGAAGAGAATCAGAAAACATTAGAAATTTTAAAAGAAAGGGAACAGTTACTGCAGGACCAACTGCAGAGTGCAAAAGAAAGTGTTTCTACTATGCAGAAATTACATGAACTTGCACAAAACAAGTTGTTTGAACTTCGTGCTCAATCTGACGAAGAGAGGGCAGCTAAGCAAGCTGAGGTCAATCTGCTGATGGATGAAGTTGAACGAGCACAAACAATGCTCCTTGGCTTGGAGAGAGAGAAGGGGGTTCTCCGATCTCAGTTACAAACCACAAATCAAGATGGTGAAATTAAGAAGAGTGATAATTCAGACTCAACTGTTGCACTTGAGAATTCTTTAATTGCCAAAGATAGGCAAATCTCTGAATTGAACATGGAGCTACACAATATTGAAACAACCTTATCAAATGAACGTGAAGAACATATGAAAGATGTCAAAAAATTTACTGCACTGCTCAATGAAAAGGAGGCTTCTATTGAGGCAATGAGGAAAGAGCTTCACGCAAGGCCAACAGAAAAGATGGTTGATGATTTGCGTAAGAAAGTGAAGATTTTGCAGGCAGTGGGTTATAATTCAATTGAGGCTGAAGACTGGGAAGTGGCAACAAGTGGGGAGGAGATGAGCAAGATGGAATCTCTTCTTCTTGATAAGAACCGAAAAATGGAACACGAGCTAACACAATTGAAGGTGAAACTTTCTGAAAAAACTTCTTCACTCGAAATAGCAGAACAGAAGGCAGTGGAACTTACTACTAAGGTTAATGAACAACAAAAACTGATACAAAAGTTGGAAGATGATATATTAAAGGGCTATAGTTCTAATTCCAAAGATCATAAAGGATTCCCTGATGACTGGGATCTATCCGAGGCTGGTAGGAGTGAGGTGTCTGAGAATATGGATCAAAGGCATGCCTTAGATCAAGATCAGAGCTCAATGCTTAAGGTAATCTGTAATCAGAGAGATCGATTCAGAATACGCTTGCGAGAGACAGAAGAGGAAATAAGGCAGTTGAAGGAGAAGATTCGGGTACTAACAGGGGAACTTGAAAAGACCAAAGCAGATAATGTCAAGCTATATGGGAAGATTCGTTATGTCCAAGATTACAATACGGCGAAAGTGGTCTCTAGGGGTTCTAAAAAGTATGCAGAAGATCTTGAAAGTGGTTTCACGTCAGATGTTGAATCTAAATACAAGAAGATATACGAGGATGATATAAATCCTTTTGCTGCATTCTCAAAAAAGGAAAGGGATCAAAGATACAAGGAGTTGGGATTCAGGGACAGAATCACACTCAGCAGCGGACGTTTTCTTCTTGGTAACAAGTATGCCCGTACCTTTGCATTCTTCTATACCATCGGGCTGCATATGTTGGTCTTTACCTGTCTCTATCGAATGTCGGCTCTGAGTTATCTTAGCCATGGCCCAGAGGAACCTCTGATTGGAGCGAGAAAGGTTGATCTTCCGCGTGGACCTTAG 2043 0.4151 MEAPQGGSERDKPTSPITVVSAFWKDFDLEKEKSILDEQGLRIAENQENSQKNRRKLAESTRNFKKASPEDKLNLFNTLLRGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALASIAEQDLKLSELESENRKMKVELEEFRTEATHLKNQQATIRRLEERSRQLELQMEEKVKEIVEIKQRNLAEENQKTLEILKEREQLLQDQLQSAKESVSTMQKLHELAQNKLFELRAQSDEERAAKQAEVNLLMDEVERAQTMLLGLEREKGVLRSQLQTTNQDGEIKKSDNSDSTVALENSLIAKDRQISELNMELHNIETTLSNEREEHMKDVKKFTALLNEKEASIEAMRKELHARPTEKMVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEMSKMESLLLDKNRKMEHELTQLKVKLSEKTSSLEIAEQKAVELTTKVNEQQKLIQKLEDDILKGYSSNSKDHKGFPDDWDLSEAGRSEVSENMDQRHALDQDQSSMLKVICNQRDRFRIRLRETEEEIRQLKEKIRVLTGELEKTKADNVKLYGKIRYVQDYNTAKVVSRGSKKYAEDLESGFTSDVESKYKKIYEDDINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYARTFAFFYTIGLHMLVFTCLYRMSALSYLSHGPEEPLIGARKVDLPRGP* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0157 680 PANTHER HOMEOBOX PROTEIN CUT 16 665 - -
Lja4g0157 680 MobiDBLite consensus disorder prediction 48 64 - -
Lja4g0157 680 PANTHER CCAAT DISPLACEMENT PROTEIN-RELATED 16 665 - -
Lja4g0157 680 Coils Coil 502 543 - -
Lja4g0157 680 Coils Coil 309 329 - -
Lja4g0157 680 Coils Coil 414 455 - -
Lja4g0157 680 MobiDBLite consensus disorder prediction 43 64 - -
Lja4g0157 680 Pfam CASP C terminal 431 657 IPR012955 GO:0006891|GO:0030173
Lja4g0157 680 Coils Coil 334 354 - -
Lja4g0157 680 Coils Coil 242 269 - -
Lja4g0157 680 Coils Coil 73 100 - -
Lja4g0157 680 Coils Coil 121 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0157 Lja-Chr4 1204326 1217759 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0157 K09313 - gmx:100780863 1129.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0157 4 1204326 1217759 Lja4g0157 4 1204326 1217759 ECH