Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0117 ATGGAAGGTGCAGAGGAGGAGCTAGAGAGAAGAAGCAGGTTTCTGAAAAGCTTGATACAGAAGAAGAAAGTCTCAGAGAAACAAGAGCAGCATGACCACATCCAAAACAACAATGTTCGGGTCAGGGCTTGTGACATGCCTCTCCTTTTGCAGAACCGTGCCTTTTGTTGCGCTCGTGATCTTCTGGATTCTATGCCAGCAAATAAGCTTGACACCAAACGCCTGGCCCTGACCCTTAAGAAGGAATTTGATTCATCCTATGGTCCAGCTTGGCACTGCATTGTGGGATCTAGCTTTGGCTCATATGTGACTCATTCTCTTGGTGGATTCTTGTATTTTTCCATTGACAAGGTCTACATCCTTCTCTTCAAGACAGCTGTTGAACCATTAGACCATCCATAA 402 0.4527 MEGAEEELERRSRFLKSLIQKKKVSEKQEQHDHIQNNNVRVRACDMPLLLQNRAFCCARDLLDSMPANKLDTKRLALTLKKEFDSSYGPAWHCIVGSSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLDHP* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0117 133 PANTHER DYNEIN LIGHT CHAIN 1 131 IPR001372 GO:0007017|GO:0030286
Lja4g0117 133 SUPERFAMILY DLC 36 125 IPR037177 GO:0007017|GO:0030286
Lja4g0117 133 Pfam Dynein light chain type 1 39 125 IPR001372 GO:0007017|GO:0030286
Lja4g0117 133 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 26 126 IPR037177 GO:0007017|GO:0030286
Lja4g0117 133 SMART Dynein_light_2 34 125 IPR001372 GO:0007017|GO:0030286
Lja4g0117 133 PANTHER DYNEIN LIGHT CHAIN 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0117 Lja-Chr4 897639 899495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0117 K10418 - gmx:100805980 243.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0117 4 897639 899495 Lja4g0117 4 897639 899495 ECH