Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0048 ATGACTTACAATACAATATTTGCCAGAAGCTTTAGTCATTATGAGCAGAAAAGATTAGGATATGGAGCATTTGTGGGTTTCTTGCTGATGGTTTTGAGTCTTTGCACTGTGTTTAAACCTTACTTGGGCCCTATACATGATTTGAACCTGAAGCTCTCCATCGGCGCTGACACCAAATTGCGGATGGTTAATGACACCAGAAGCTCTCAACATATAGCCAAAGTTGAAGATAAAGAAACAAAGAGAGTAGAGCAAATGTGCATTACAGAAGAAAGAACAGAATATTGCCAAACCCAGGGAGATGTCCGAGTGCATGGAAAATCCTCCTCTGTCTACGTCGTGTCACCTAAAACAACCATTTTGGCAGAAAACATCTCATGGAGTATAAGGCCTTATGCTCGGACGAGTGATGCAGCTGCAATGAGTAGTGTAAGAAAATGGTCAGTGAAACCAATAGAAGTAAGCCAGGGAATCCCCCAGTGCACCCAAAATCACAGTATTCCAGCAGTAATATTTTCCACAGCAGGGTATACTGGCAACAACTTCCATGAATTCACTGACGTTGTTATTCCATTGTTTTTGACTTCTAGACAATTCAAAGGAGAAGTACAATTTATCATAACTGATAAGAGGCATTGGTGGATTTTAAAGCACCAAGCATTTCTTAAAAAGCTGTCCAACTATGAGATTATGGACATTGACAGTGACGAGGAAGTACATTGCTTCCCAAGGGTGAATGTGGGTCTCAAAAGGTATCATAAAGAGCTAAGCATTGACCCTCAAAAGTATTCCTATTCAATGAAAGACTTCAGGGATTTTTTGAGAAGTTCCTATTCATTGAAGAGAGTTAAAGCAACCAGAATCAGAGGTAGTCAACGTAAGAAGCCCAGGCTCCTGATTCTTTCAAGAAAAAGATCAAGATCCTTCACCAATGCAGCTCAAATAGCGAGATTGGCTAAAGGCATGGGTTTCAGTGTCATTGTTATGGAGGCAGGGGGGAGCATGAAAAGCTTTGCACAAGTTGTGAATTCTTGTGATGTCCTACTGGGAGTTCATGGTGCTGGTCTCACTAACATACTTTTCCTTCCAGAAAATGCAATTTTCATCCAAGTTGTGCCTTATGGTGGAGTGGAATGGCTTGCCACCAATGACTTTGGAGAGCCCTCAGAGGATATGAACATCAAATACTTGGAATACAAAATACAGTTGGAAGAAAGCACTCTTATTCAACAATACCCCCGAGATCATATGGTCATAAAGGATCCGTCATCAATTGGGAAACTAGGATGGGAAGCATTTAGGTCTGTGTATTTGGATAAACAAAATGTAAGGCTTGATGTTAATAGGTTTAGGCCAACATTGCAGAAATCCCTTGAGCTGTTGCATCAATAG 1392 0.408 MTYNTIFARSFSHYEQKRLGYGAFVGFLLMVLSLCTVFKPYLGPIHDLNLKLSIGADTKLRMVNDTRSSQHIAKVEDKETKRVEQMCITEERTEYCQTQGDVRVHGKSSSVYVVSPKTTILAENISWSIRPYARTSDAAAMSSVRKWSVKPIEVSQGIPQCTQNHSIPAVIFSTAGYTGNNFHEFTDVVIPLFLTSRQFKGEVQFIITDKRHWWILKHQAFLKKLSNYEIMDIDSDEEVHCFPRVNVGLKRYHKELSIDPQKYSYSMKDFRDFLRSSYSLKRVKATRIRGSQRKKPRLLILSRKRSRSFTNAAQIARLAKGMGFSVIVMEAGGSMKSFAQVVNSCDVLLGVHGAGLTNILFLPENAIFIQVVPYGGVEWLATNDFGEPSEDMNIKYLEYKIQLEESTLIQQYPRDHMVIKDPSSIGKLGWEAFRSVYLDKQNVRLDVNRFRPTLQKSLELLHQ* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0048 463 Pfam Glycosyltransferase 61 268 366 IPR007657 GO:0016757
Lja4g0048 463 PANTHER FAMILY 61 PROTEIN, PUTATIVE-RELATED 80 463 - -
Lja4g0048 463 PANTHER FAMILY 61 PROTEIN, PUTATIVE-RELATED 2 73 - -
Lja4g0048 463 PANTHER GLYCOSYLTRANSFERASE 80 463 IPR007657 GO:0016757
Lja4g0048 463 PANTHER GLYCOSYLTRANSFERASE 2 73 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0048 Lja-Chr4 401551 407265 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0048 - - lja:Lj4g3v3114090.1 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0048 4 401551 407265 Lja4g0048 4 401551 407265 ECH