Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0042 ATGGGTGAAGTTCTGATGCTGGAGGCTCCACCCTCCTACGGTGGTTTGCCTAGGAGTTCCGACGCCGAAATCATCGACGCTTTGCCTTACATCGACGATGACTACGGCGACCCTAGAGTGAAGGTTGAGGTCGACCGTCTCGTCGAGGATGAGATGCGCCGCAGCTCCAAGAAGCCCGCTGATTTCCTCAAAGATTTCCCTCCTCTTCCCACCTCTAATCTTGAGGGTTATCCAATGATTGCTAGAGAGTATGAGCGTGTGAGAGCTGGAAGACCTCCTGTTTCCATTGACAGGTCGCGATATGAATTAGAAATACCTCCGCTTAACAAAAGGAATGATGAAACTGCCTGGAAGCATGCTCTTCAAAGAGCTCAACGCCTCCTGCAATATCAGATGATGAGGATGGAAAATATAGAGTTGTTGTTAAAGTATGGCCCTGATGCCTGGAAACAGCACAACCACCGATTGGAAGTTTACTTGTTAAGAATGCAGAAATTAGCTCAGGAACAAAATGAGAAGATTGAAAAAGTAAATCGTGAAAGGAAATATCACCAGCAAAATACTGCATATGAGCTTAATGCATTGTCCACACAATGGAATGAGCTCTGTCAGAAAAATATAGACATCAATGCTGCGTGCGCATCAGTTGAAACTCGCATAAATGAGCTGAAGAGAGAAGCAGCAGAAAGAGGCTGGAACTTGGATGCTATCTCTGAAAATGGCCAATTGGCCAATTCGGAATCATGA 747 0.4565 MGEVLMLEAPPSYGGLPRSSDAEIIDALPYIDDDYGDPRVKVEVDRLVEDEMRRSSKKPADFLKDFPPLPTSNLEGYPMIAREYERVRAGRPPVSIDRSRYELEIPPLNKRNDETAWKHALQRAQRLLQYQMMRMENIELLLKYGPDAWKQHNHRLEVYLLRMQKLAQEQNEKIEKVNRERKYHQQNTAYELNALSTQWNELCQKNIDINAACASVETRINELKREAAERGWNLDAISENGQLANSES* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0042 248 Coils Coil 160 187 - -
Lja4g0042 248 Coils Coil 206 226 - -
Lja4g0042 248 PANTHER PRE-MRNA-SPLICING FACTOR SPF27 18 231 - -
Lja4g0042 248 Pfam Breast carcinoma amplified sequence 2 (BCAS2) 23 229 IPR008409 GO:0006397
Lja4g0042 248 PANTHER BCAS2 PROTEIN 18 231 IPR008409 GO:0006397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0042 K12861 - gmx:100783349 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0042 4 332832 335628 Lja4g0042 4 332832 335628 ECH