Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0028 ATGGCTACTTTCTTTGGTTCCCCACCAGTTTTCTCCCTCCCCCTTACAAGAAACAGTCATCACATTGCTTCATCATCACCAACACCTCCACCAATTCCTCCCCAGCAATCTCAGTCCCCAACTGCGTCATCTTCACAATCAGTTCAGGGCACTGCCAAAGCACAGCCACAGAACCCCATCAAACCTGTCACTTCATCAACCAAGGTTGATTCCACAGATTGGATAGCCACTTCCTTGACCAGACGGTTCGGGCTAGGAGCTGGTCTTGCATGGGTTGGTTTTCTTGCATTTGGTGTTGTCTCAGAACAGATTAAGACTCGCCTAGAGGTTTCTCAGCAAGAGGCAAATACAAGGGACGTAGAGAAGGAGGAAGAGGTGACACTTCCTAATGGAATAAGGTACTGTGAATTGAAAGTTGGTGGTGGCGCTTCACCAAGACCAGGTGATTTGGTTGTGATTGATATCATGGGAAAGGTTGAAAGCACTGGAGAAGTATTTGTGAATACATTCGAGGGAGACAAGAAACCATTGGCTCTAGTAATGGGTTCAAGGCCATATAGCAAGGGAGTTTGTGAAGGGATAGAATATGTGCTGAAAACTATGAAGGCTGGAGGCAAAAGGAAAGTAATAGTCCCTCCCCAGTTGGGATTTAGGGAGAATGGTGCTGATTTAGGCTCTGGTGTGCAAATTCCTCCACTTGCAACACTTGAATACATTGTAGAGGTTGACAAGGTTTCCATTGCACCTGCTTGA 753 0.4635 MATFFGSPPVFSLPLTRNSHHIASSSPTPPPIPPQQSQSPTASSSQSVQGTAKAQPQNPIKPVTSSTKVDSTDWIATSLTRRFGLGAGLAWVGFLAFGVVSEQIKTRLEVSQQEANTRDVEKEEEVTLPNGIRYCELKVGGGASPRPGDLVVIDIMGKVESTGEVFVNTFEGDKKPLALVMGSRPYSKGVCEGIEYVLKTMKAGGKRKVIVPPQLGFRENGADLGSGVQIPPLATLEYIVEVDKVSIAPA* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0028 250 SUPERFAMILY FKBP-like 72 245 - -
Lja4g0028 250 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 144 242 IPR001179 GO:0003755
Lja4g0028 250 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC 1 250 - -
Lja4g0028 250 MobiDBLite consensus disorder prediction 38 67 - -
Lja4g0028 250 MobiDBLite consensus disorder prediction 16 67 - -
Lja4g0028 250 Gene3D - 107 245 IPR046357 GO:0003755
Lja4g0028 250 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 148 246 IPR001179 GO:0003755
Lja4g0028 250 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0028 Lja-Chr4 245702 247025 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0028 - - lang:109332983 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0028 4 245702 247025 Lja4g0028 4 245702 247025 ECH