Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0027 ATGGGCACTGTGATTGACTCTCATTTCTTAGGCCTCACCGCCATTGTCACTATTGGGTACCAGTTCCTGTTTTTCATCATCACTGCACTCCTCAAGTTCGACAAGGTCACTGATTTCGCCGGAAGTACCAATTTCGTTATAATCGCTCTACTCACCCTGCTGCTCAAAGCCTCCTGGCATTTTCGACAGATTGTCCTCACTTTCTTTGTTGTCTTATGGGGTCTCCGCCTCGGCCTTTTCCTCTTATTCAGGATTTTGCAGTGGGGAGAGGATAGACGTTTTGATGAAATGCGCACTAATTTCGGTAGATTGGCAATATTTTGGATATTCCAGGCTGTCTGGGTGTGGGCTGTGAGTTTGCCTGTTACACTGGTTAATGCAAGCGACAGAAATCCTTTTCTACAGATTGAGGATATAATAGGCTGGATTATGTGGACTCTAGGCTTTATTATTGAAGGTACAGCAGATCAACAAAAGCTGCGTTTCAAAAAGTCCCCAGAAACTAGAGGGAGGTGGTGCAATATTGGACTGTGGAAATATTCTCGTCATCCTAACTATTTTGGTGAGATATTGCTTTGGTGGGGGATTTTTGTGGCATCTTCACCTGTACTCAAGGGTGCTGAATGGCTAGTAATCATTGGACCAATCTTCCTCACATTGTTGCTTCTTTTTGTCAGTGGCATTCCGCTGCTTGAGGAATCAGCAGATAAGAAATTTGGTAATGTGGATGGATATAGGAGATACAAAGAAAGAACCAGCCCTTTAATCCTGTTACCTCCACCGGTCTATGGAAAGTTACCCGCATGGTTCAAAACAATTTTTCTCTTCGAATTTCCATTCTACAGTCGTAATCTCCCACAACAAGAACCAAACTGCTGA 879 0.4357 MGTVIDSHFLGLTAIVTIGYQFLFFIITALLKFDKVTDFAGSTNFVIIALLTLLLKASWHFRQIVLTFFVVLWGLRLGLFLLFRILQWGEDRRFDEMRTNFGRLAIFWIFQAVWVWAVSLPVTLVNASDRNPFLQIEDIIGWIMWTLGFIIEGTADQQKLRFKKSPETRGRWCNIGLWKYSRHPNYFGEILLWWGIFVASSPVLKGAEWLVIIGPIFLTLLLLFVSGIPLLEESADKKFGNVDGYRRYKERTSPLILLPPPVYGKLPAWFKTIFLFEFPFYSRNLPQQEPNC* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0027 292 Pfam Protein of unknown function (DUF1295) 24 252 IPR010721 -
Lja4g0027 292 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 141 209 IPR001104 GO:0006629|GO:0016627
Lja4g0027 292 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 5 289 IPR010721 -
Lja4g0027 292 Gene3D - 57 259 - -
Lja4g0027 292 PANTHER - 5 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0027 Lja-Chr4 241287 244490 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0027 - - gmx:100780288 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0027 4 241287 244490 Lja4g0027 4 241287 244490 ECH