Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0013 ATGCTCACCGTCAAATTCCTTTTCTCTCTACTCCTCACCTTCTCTCTCCTCTCCGTCTCCGTCACCGTCACCGCCCGTCCCTTCGTCCTCGTCCTTTCCCAGGAAGACTTCAAGGACGAAGCCCCCACCGATTCCGACTCCGCCGCCGAGTGGGACGACTTCGGCGACTCCGACCCCCACAAGTCCGAGGACGATCTCGACCCCGGCTCATGGCGCCCCATCTTCGAGCCCGAACCCTCTCCCTCCGACTCCGACTACGACTCCCTCTACTACTCCGGCGTCGCCAAGCTCATATCCGGTGACGCCCGTGAGGGAGCTGGGGAGATCGAGGCAGCGGCTGAATCTGGCCACCCGGCGGCGCAATCTGTCTTAGGGTTTTTGTGGGGAATGGGGCTTTTGAGAGAAAGAAGCAAATCCAAGGGTTTTCTGTACCATCACTTTGCTGCTGAGGGTGGCAATATGCAGTCCAAGATGGCTCTCGCTTACACCTACACACGCCAAGATATGTTTGAAAAAGCCGTTAAGCTTTATGGCGAATTAGCACAAGTAGCAGTCAATAGTTTTCTCATTTCAAAGGACTCACCGGTCATTGAACCGGTCAGGCTTCACAACGGAGCTGAGGAGAACAAGGAAGCTCTCAGAAAATCCAAAGGGGAAGAGGATGATGACTTTCAGATTCTCGAGTACCAGGCTCAGAAAGGGAATGCCGCTGCCATGTACAAGGTTGGCCTCTTTTACTACTTCGGCCTCCGAGGCTTGAGGCGTGACCACTCCAAGGCACTCTCCTGGTTCTTGAAGGCTGTTGACAAGGGTGAGCCTCGCTCCATGGAGCTTCTCGGTGAGATCTATGCTAGAGGAGCTGGTGTTGACAGAAACTACACTAAGGCCTTCGAATGGCTTACCCTTGCTTCCAAACACCACCTCTATTCTGCTTATAATGGCATGGGCTATTTGTACGTCAAAGGCTATGGTGTTGACAAGAAGAATTACACTAAAGCAAAAGAGTATTTTGAAATGGCTGCTGATAATGATGAGGTTGGCGGCCACTATAACCTCGGTGTCATGTATCTCAAGGGGATTGGAGTGAAAAGAGATGTCAAGCTGGCTTGCAAGTTCTTTATAGTGGCTGCAAACCACGGTCAACCAAAGGCATTCTACCAGCTGGCAAAGATTTTCCATCTTGGTGTTGGCTTCAAGAAGAATATTCCCTTGGCTACTGCCCTATACAAACTAGTTGCAGAGCGAGGTCCATGGAGTTCTCTGTCTAGATGGGCACTAGAGTCATACTTAAAAGGTGATATTGGGAAGGCTTTTATGTTGTATTCAAGGATGGCTGAGCTGGGCTATGAGGTGGCACAAAGTAATGCTGCTTGGATTCTTGACAAATATGGAGAACGTAGCATGTGCATGGGTGAAATTGGATTTTGCACTGATGCAGAAAGGCATCAGAGGGCACATTCTCTTTGGTGGCAAGCTTCTGAGCAGGGTAATGAACATGCTGCTTTACTCATTGGAGATGCATATTACTACGGTCGGGGTACTAACAGGGACTATGAGCGAGCTGCTGAGGCTTACATGCATGCCAAATTGCAATCTAATGCACAAGCCATGTTCAATCTTGGTTACATGCATGAGCATGGCCATGGACTTCCATTTGACCTTCATATGGCCAAGCGTTACTATGATGAAGCTCTAGAGCATGATGCTGCAGCCAAGTTGCCAGTCACATTGGCTCTTACAAGCTTGTGGGTCCGCAAGAACTATGCTGACAGTTTCTTGGTCGGTATGATTGATTCATTGCCAGACGTGTATCCTAAATTAGAAGCTTGGGTGGAGGATGTACTCTTAGAGGAGGGAAATGCCACTATTCTCACCCTCTTTGTATGCCTCCTAACTGTGCTATATCTCCGTGAGAGGCAACGAAGGCAAGTTGCTGTTGTAGCTGGAGAGGTAGCTCAGCAAAATCGTCCTAACGAACTTGGTGTACCTGCACCCATCTAA 2001 0.4963 MLTVKFLFSLLLTFSLLSVSVTVTARPFVLVLSQEDFKDEAPTDSDSAAEWDDFGDSDPHKSEDDLDPGSWRPIFEPEPSPSDSDYDSLYYSGVAKLISGDAREGAGEIEAAAESGHPAAQSVLGFLWGMGLLRERSKSKGFLYHHFAAEGGNMQSKMALAYTYTRQDMFEKAVKLYGELAQVAVNSFLISKDSPVIEPVRLHNGAEENKEALRKSKGEEDDDFQILEYQAQKGNAAAMYKVGLFYYFGLRGLRRDHSKALSWFLKAVDKGEPRSMELLGEIYARGAGVDRNYTKAFEWLTLASKHHLYSAYNGMGYLYVKGYGVDKKNYTKAKEYFEMAADNDEVGGHYNLGVMYLKGIGVKRDVKLACKFFIVAANHGQPKAFYQLAKIFHLGVGFKKNIPLATALYKLVAERGPWSSLSRWALESYLKGDIGKAFMLYSRMAELGYEVAQSNAAWILDKYGERSMCMGEIGFCTDAERHQRAHSLWWQASEQGNEHAALLIGDAYYYGRGTNRDYERAAEAYMHAKLQSNAQAMFNLGYMHEHGHGLPFDLHMAKRYYDEALEHDAAAKLPVTLALTSLWVRKNYADSFLVGMIDSLPDVYPKLEAWVEDVLLEEGNATILTLFVCLLTVLYLRERQRRQVAVVAGEVAQQNRPNELGVPAPI* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0013 666 SUPERFAMILY HCP-like 88 182 - -
Lja4g0013 666 Gene3D Tetratricopeptide repeat domain 83 187 IPR011990 GO:0005515
Lja4g0013 666 SUPERFAMILY HCP-like 217 327 - -
Lja4g0013 666 Gene3D Tetratricopeptide repeat domain 425 587 IPR011990 GO:0005515
Lja4g0013 666 SMART sel1 498 533 IPR006597 -
Lja4g0013 666 SMART sel1 118 153 IPR006597 -
Lja4g0013 666 SMART sel1 236 272 IPR006597 -
Lja4g0013 666 SMART sel1 309 345 IPR006597 -
Lja4g0013 666 SMART sel1 382 417 IPR006597 -
Lja4g0013 666 SMART sel1 346 381 IPR006597 -
Lja4g0013 666 SMART sel1 273 308 IPR006597 -
Lja4g0013 666 SMART sel1 534 569 IPR006597 -
Lja4g0013 666 Gene3D Tetratricopeptide repeat domain 311 424 IPR011990 GO:0005515
Lja4g0013 666 Pfam Sel1 repeat 236 271 IPR006597 -
Lja4g0013 666 Pfam Sel1 repeat 431 449 IPR006597 -
Lja4g0013 666 Pfam Sel1 repeat 534 568 IPR006597 -
Lja4g0013 666 Pfam Sel1 repeat 349 380 IPR006597 -
Lja4g0013 666 Pfam Sel1 repeat 274 306 IPR006597 -
Lja4g0013 666 Pfam Sel1 repeat 118 153 IPR006597 -
Lja4g0013 666 Pfam Sel1 repeat 310 344 IPR006597 -
Lja4g0013 666 Pfam Sel1 repeat 500 522 IPR006597 -
Lja4g0013 666 MobiDBLite consensus disorder prediction 40 87 - -
Lja4g0013 666 SUPERFAMILY HCP-like 327 458 - -
Lja4g0013 666 MobiDBLite consensus disorder prediction 53 71 - -
Lja4g0013 666 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 6 648 IPR044623 GO:0030433
Lja4g0013 666 SUPERFAMILY HCP-like 429 568 - -
Lja4g0013 666 Gene3D Tetratricopeptide repeat domain 200 310 IPR011990 GO:0005515
Lja4g0013 666 PANTHER ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT HRD3A-RELATED 6 648 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0013 K14026 - gmx:100787823 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0013 4 109291 113289 Lja4g0013 4 109291 113289 ECH