Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5186 ATGGAAGCCATAACAGAGGGAGTGAACAACATCAACATCAGCACCAACAACAACGATTCGTTCAAGAAGAATCGGATTCAAGTCTCCAACACCAAGAAGCCTCTCTTCTTCTACGTTAATCTCGCCAAGAGATATATGCAACAGCATAATGAGGTCGAGCTCTCCGCACTTGGAATGGCTATTGCCACGGTGGTAACTGTTGCTGAAATTTTGAAGAATAACGGGCTTGCTGTTGAAAAGAAAATTTTGACATCAACAGTTGACATCAAGGATGATTCTAGAGGTAGACCTGTCCAAAAGGCCAAGATTGAAATAGTACTTGGGAAAACAGCACACTTCGATGAGCTCATGGCTGCTGCAGCTGCTGAAGATGCTGAAAATGGTGATCTTGAAGAGCAGCAGGGTGCATGA 411 0.4404 MEAITEGVNNINISTNNNDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHNEVELSALGMAIATVVTVAEILKNNGLAVEKKILTSTVDIKDDSRGRPVQKAKIEIVLGKTAHFDELMAAAAAEDAENGDLEEQQGA* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5186 136 SUPERFAMILY AlbA-like 23 118 IPR036882 GO:0003676
Lja3g5186 136 Pfam Alba 24 85 IPR002775 GO:0003676
Lja3g5186 136 PANTHER DNA/RNA-BINDING PROTEIN ALBA 3 1 129 IPR014560 -
Lja3g5186 136 PIRSF UCP030333_Alba 1 136 IPR014560 -
Lja3g5186 136 Gene3D - 22 133 IPR036882 GO:0003676
Lja3g5186 136 PANTHER - 1 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5186 Lja-Chr3 94178219 94180622 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5186 - - lang:109351177 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5186 3 94178219 94180622 Lja3g5186 3 94178219 94180622 ECH
Lja3g5186 3 94178219 94180622 Lja3g2133 3 24953498 24956116 PCT