Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5161 ATGGCTAGGGGCTTCGAGAAGCTTCGCCGGTGCGCTCGGACGGTTTTCTTCGTCGCGGCATTGGTGGCGTCGCTGCTGGTTACCTCGCTGCCGGTGCTTGTGGCGGCGGTTGATGTGCTCGTTCCTTGCGTTTTGATTTCCAGCTTCACGTGCGTCAGGTGCTATGGTTTCAAGGAGCATTTGCGTCGATACGATTTTAAGAGCTCGTTGACGGACATTCCTCTCGTTTCAGTCATACGATCGCTCATCATTATCTGTGTTTATTCCATTTGTGATGGTCCTGCTCTCTCACATGGACCTTACCTTGGAACGGTGACTGTGTGTTCCTTTGTTTCTATTGCTGTTCTTTCAGTGAAAGCTTGTGTTTCCACCGTGAATTCCCAGATTGAGGCGGAAGCTTCAGTTTCCATTACAAGGAAGATACTCCGTTTGAAAAAGTCATGGGGAATGCCTGTCTTATTTCTCTCGTCAGTTGTGTTTGCCCTTGGCCATATTGTGGTTGCTTATAGAACCAGCTGTAGAGCAAGGAGAAAGCTCATGTTTCATCGAGCTGACCCTGAAGCTGTCCTTTCATGCAAAAATGTATTCTCTGGCTATCAGAAGGTCCCACGCTCTCCTGTACCTTCTGGGGGTCGAACCCCAAAAAGTGACAGTGAAATGAGGCGGCGACCTTTCGGAGCAGCTCGTGATGAAGAAGTGCCAGTCAGGTTACTTGCAGACTCGGACAGCTTATTCATCACCTGCCAAGGTCTCACTCTCCATTACAAGCTCAGCCTGCGTGGTCCACCTCTGCTTACCTTGTCCTCAAAATCCTTGCTTGAATCTAGTGCTTTTTGCAGCACTGCATCAAAGTCTGGGGGTCTGTCGCAGTTTAATAGACATTTGACATGTGTGTCTCCAAACATCCAGAGACAACTTTTCAGGAGCTATAGCAATCAATTCCATGGCTCATCTTTACATACTCCTCTCTTAGATGGTTCAGTAACTTCTCCCCATCTTTCAGAAGATCTCCCTGTTTTGCATCTAGATGAAATCCATGAAGATGATGAAACACTTAAATCAGATTCTTTGTCTTTCGAGCAAAATTTAGAGGGCATTGGCCAAGTGGGTATTGTTTTAATACATGGGTTTGGGGGAGGAGTCTTCTCTTGGCGGCATGTAATGGGATCTCTAGCTCAGCAGAGTAATTGCACAGTTGCTGCATTTGATAGACCTGGTTGGGGATTGACTTCAAGACTGCGGCGGGAGGATTGGGAGAAAACTGAACTGCCTAATCCTTATAAACTTGAAAGTCAGGTTGACCTGCTTTTATCTTTCTGTTCGGAGCTTGGATTTTCTTCAGTTGTGCTAATTGGTCATGATGATGGAGGGTTGCTTGCTCTGATGGCTGCACAAAGAGTTCAAACATCGATGAATTCTTTCAATGTTACTGTGAAAGGGGTTATATTGTTAAATGTTAGCTTGTCAAGGGAAGTAGTTCCTTCCTTTGCTAGAATCCTTCTGCATACCTCACTTGGAAAGAAGCATTTGGTTCGGCCACTACTAAGAACTGAAATCACTCAAGTGGTGAATCGGCGTTCATGGTATGATGCTACCAAACTGACAACAGAAGTTTTGACACTCTATAAGGCTCCTCTATATGTAGAAGGATGGGATGAAGCACTTCATGAGATTGGTAAATTGTCATCTGAAACCATCCTTTCGGCAAAAAACTCAGAATCATTGCTACATGCTGTAAAAGACATTTCAGTGTTGGTTATAGCTGGCGCTGAAGATTCACTTGTCTCTTTGAAATCATGTCAGGCGATGGCCTCAAAATTTGTAAATTCTAGACTGGTTGCAATATCAGGGTGTGGCCATCTACCCCATGAGGAGTGTCCAAAGGCGTTGCTTGCAGCTATATTAGCCTTCATTAGTAAGCTATTCTCTATTGATCATGAATATAATTTAGCATGTTGTTTTTATGATGTAGTGTTTATGTTTATTTTCAATTTCAAGCTTTTATTCTAG 2010 0.4428 MARGFEKLRRCARTVFFVAALVASLLVTSLPVLVAAVDVLVPCVLISSFTCVRCYGFKEHLRRYDFKSSLTDIPLVSVIRSLIIICVYSICDGPALSHGPYLGTVTVCSFVSIAVLSVKACVSTVNSQIEAEASVSITRKILRLKKSWGMPVLFLSSVVFALGHIVVAYRTSCRARRKLMFHRADPEAVLSCKNVFSGYQKVPRSPVPSGGRTPKSDSEMRRRPFGAARDEEVPVRLLADSDSLFITCQGLTLHYKLSLRGPPLLTLSSKSLLESSAFCSTASKSGGLSQFNRHLTCVSPNIQRQLFRSYSNQFHGSSLHTPLLDGSVTSPHLSEDLPVLHLDEIHEDDETLKSDSLSFEQNLEGIGQVGIVLIHGFGGGVFSWRHVMGSLAQQSNCTVAAFDRPGWGLTSRLRREDWEKTELPNPYKLESQVDLLLSFCSELGFSSVVLIGHDDGGLLALMAAQRVQTSMNSFNVTVKGVILLNVSLSREVVPSFARILLHTSLGKKHLVRPLLRTEITQVVNRRSWYDATKLTTEVLTLYKAPLYVEGWDEALHEIGKLSSETILSAKNSESLLHAVKDISVLVIAGAEDSLVSLKSCQAMASKFVNSRLVAISGCGHLPHEECPKALLAAILAFISKLFSIDHEYNLACCFYDVVFMFIFNFKLLF* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5161 669 PANTHER ALPHA/BETA FOLD HYDROLASE 3 644 - -
Lja3g5161 669 PRINTS Epoxide hydrolase signature 615 637 IPR000639 GO:0003824
Lja3g5161 669 PRINTS Epoxide hydrolase signature 375 393 IPR000639 GO:0003824
Lja3g5161 669 PRINTS Epoxide hydrolase signature 450 463 IPR000639 GO:0003824
Lja3g5161 669 Gene3D alpha/beta hydrolase 360 645 IPR029058 -
Lja3g5161 669 MobiDBLite consensus disorder prediction 203 225 - -
Lja3g5161 669 SUPERFAMILY alpha/beta-Hydrolases 371 640 IPR029058 -
Lja3g5161 669 Pfam Alpha/beta hydrolase family 371 632 IPR000073 -
Lja3g5161 669 PANTHER HYDROLASE 3 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5161 Lja-Chr3 93980036 93984751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5161 1 645 Miscellaneous Gene Families AT1G80280 62.935 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5161 - - lang:109358620 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5161 3 93980036 93984751 Lja3g5161 3 93980036 93984751 ECH
Lja3g5161 3 93980036 93984751 Lja3g2114 3 24706913 24712010 PCT