Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5160 ATGGAGGCTGTTCTTCATTCTAGAGGGCTTCTTTCTCTTCCCCCAAACCCCAGAAACAGGGTCTTACACCCTTCCCATGGCTTAAAGCAAAGATTTTTCACTCCAAAACCTAAATTCCCATCTGGGTCTCCTCTTTCTTCTCTATCTTCTCATGGGTTGTTGTCAAAATTCAATCTTTCTGCCTCCAAAACTAATGTCTTTAGTCAAAAGGACAAGAAAAATTTGTTCATTTGCAGGGCTGAAGCTGCTGCTGCTGCTGATGGTGGGAAGCCACTGTTCGGGGAATCCGAGGTTGAAAAACCGAAGATTCTGGGTGTTGAGGTTGCTACCCTCAAGAAGATTATACCACTTGGGATGATGTTTTTCTGCATCCTGTTCAACTACACCATTCTAAGGGATACTAAGGATGTTTTGGTTGTGACGGCGAAGGGAAGCAGTGCTGAGATTATACCGTTTTTGAAAACTTGGGTGAATCTTCCTATGGCTATTGGGTTTATGTTGTTGTATACCAAGTTGTCGAATGTGTTGTCTAAGCAGGCTTTGTTTTACACTGTTATTGTCCCCTTTATTGCATTCTTTGGGGCATTTGGGTTTCTTTTGTACCCTCTTAGCAGCTATATCCACCCTGAGGCGTTTGCGGATAAGCTTCTTAACATCCTTGGGCCGAGGTTCCTTGGTCCTCTTGCAATCATGAGAATCTGGACTTTCTGTTTGTTCTATGTTATGGCTGAATTGTGGGGGAGTGTGGTTGTTTCTGTGCTGTTTTGGGGGTTGGCTAATCAGATAACTACAGTTGATGAAGCAAAGCGGTTCTACCCACTATTTGGACTTGGGGCCAATGTAGCCCTCATATTCTCTGGCCGGACAGTGAAATACTTTTCCAATATGAGAAGCAATTTAGGTCCTGGAGTTGATGGTTGGGCCATCTCTCTAAAAGCAATGATGAGCATAGTTGTGGGCATGGGACTTGTAATCTGTTTCCTGTATTGGTGGGTGAATAACTATGCTCCTCTTCCAGAACGTAGCAGGAAGAAGAAGGAGAAGCCCAAAATGGGAACAATGGAGAGCTTGAAGTTCTTGGTGTCTTCAAAATATATAAGGGATCTTGCTACATTAGTGGTTGCATATGGAATTAGTATCAATCTTGTTGAGGTTACATGGAAATCAAAGCTCAAAGCTCAGTATCCTAGCCCGAATGAGTACTCAGCTTTTATGGGAGACTTCTCAACTGCAACTGGAATTGCTACATTCATAATGATGCTTCTAAGCCAATTTGTTTTTGACAAATATGGATGGGGAGTTGCTGCCAATATCACGCCTACCGTCCTACTCTTGACCGGAGTTGGTTTCTTTTCTCTCATATTATTTGGCGGCCCGATTGCACCTATGCTAGCGCAGTTTGGAATGACACCACTGCTAGCTGCTGTCTATGTTGGTGCGTTGCAGAACATATTCAGCAAGAGTGCCAAGTACAGCTTATTCGATCCATGCAAAGAAATGGCCTACATACCCTTGGATGAGGACACCAAGGTCAAGGGGAAGGCAGCCATTGATGTTGTTTGCAACCCATTGGGGAAATCTGGAGGTGCTCTGATTCAGCAGTTTATGATCTTAAGTTTTGGTTCACTAGCCAATTCAACTCCATACCTGGGAGGAGTGCTTCTGGTGATTGTTCTTGCCTGGTTAGCAGCAGCCAGGTCCCTGGACACTCAGTTCACCGCCTTGCGTCGCGAAGAAGAGATTGAAAAAGAAATGGAAAGAGTGGCTTCAGTTAAGATTCCAGTGGTGGCTGAAAACAAGGATGGAAATGGTTCTCTTGCAAGTGCTTCTACAGCAGGTGACTCCTCAATTAGTCCTTCTGAAGCCTCAACTAGTTCTTCATGA 1884 0.4427 MEAVLHSRGLLSLPPNPRNRVLHPSHGLKQRFFTPKPKFPSGSPLSSLSSHGLLSKFNLSASKTNVFSQKDKKNLFICRAEAAAAADGGKPLFGESEVEKPKILGVEVATLKKIIPLGMMFFCILFNYTILRDTKDVLVVTAKGSSAEIIPFLKTWVNLPMAIGFMLLYTKLSNVLSKQALFYTVIVPFIAFFGAFGFLLYPLSSYIHPEAFADKLLNILGPRFLGPLAIMRIWTFCLFYVMAELWGSVVVSVLFWGLANQITTVDEAKRFYPLFGLGANVALIFSGRTVKYFSNMRSNLGPGVDGWAISLKAMMSIVVGMGLVICFLYWWVNNYAPLPERSRKKKEKPKMGTMESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTATGIATFIMMLLSQFVFDKYGWGVAANITPTVLLLTGVGFFSLILFGGPIAPMLAQFGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGGVLLVIVLAWLAAARSLDTQFTALRREEEIEKEMERVASVKIPVVAENKDGNGSLASASTAGDSSISPSEASTSSS* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5160 627 PANTHER - 1 608 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lja3g5160 627 PANTHER ADP,ATP CARRIER PROTEIN 2, CHLOROPLASTIC 1 608 - -
Lja3g5160 627 SUPERFAMILY MFS general substrate transporter 232 566 IPR036259 -
Lja3g5160 627 TIGRFAM AAA: ADP/ATP carrier protein family 106 572 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lja3g5160 627 MobiDBLite consensus disorder prediction 603 627 - -
Lja3g5160 627 Pfam TLC ATP/ADP transporter 102 572 IPR004667 GO:0005471|GO:0006862|GO:0016021
Lja3g5160 627 MobiDBLite consensus disorder prediction 600 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5160 Lja-Chr3 93958700 93962669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g5160 1 621 Organic Solute Cotransporters AT1G80300 78.822 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5160 K03301 - jre:108993173 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5160 3 93958700 93962669 Lja3g5160 3 93958700 93962669 ECH
Lja3g5160 3 93958700 93962669 Lja3g2113 3 24675189 24679829 PCT