Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5131 ATGTCAATCTCAAAATTGAAAGCTTACACCAATCTCCTCTGCCGACGCAACCACCAAAACAGCGTCGTTTTCACCACGCGCCGCCGTCAGGTGACATGCACGGCGGGGATCCTCCTCTTTCTGACGACGGCGTACATTTTCTGGCCGACGGATCCCGATCTGAAGATCGTGCGGCTGAAGCTGAAGCGGATCAAGGTGCATCGGTTTCCGCGCGTGACGGTGGACATCTCCATGATCCTCACGCTGATGGTGAGCAACGCCGGCGTGTACTCCATAGATTTCGGCGCGGTGGACGTGGTGGTTGCGTATAGGGGGAAGGCGCTGGGGCACGTGACGTCGGAGCACGGGCACGTGAGTGCGAGAGGATCGTCCCACGTGGACGCTGACGTGGAATTTGAGGGGATTGGTGTGGTCCCTGATATGGTGATGTTGCTGGAGGACGTGGCTAAGGGTATGGTGCCCTTTGATACTGTTAGTGAGGTTAGGGGCCAAATGGGGCTTCTCTTCCTTCACTTCCCAATGCAGGCAAAACAATCATGTGAAATTTTGGTCAGTACATTAAACCATACAATTATTCGCCAACATTGTCTTCGCGAGTGA 600 0.545 MSISKLKAYTNLLCRRNHQNSVVFTTRRRQVTCTAGILLFLTTAYIFWPTDPDLKIVRLKLKRIKVHRFPRVTVDISMILTLMVSNAGVYSIDFGAVDVVVAYRGKALGHVTSEHGHVSARGSSHVDADVEFEGIGVVPDMVMLLEDVAKGMVPFDTVSEVRGQMGLLFLHFPMQAKQSCEILVSTLNHTIIRQHCLRE* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5131 199 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 10 198 - -
Lja3g5131 199 SUPERFAMILY LEA14-like 38 145 - -
Lja3g5131 199 Pfam Late embryogenesis abundant protein 82 172 IPR004864 -
Lja3g5131 199 PANTHER EXPRESSED PROTEIN 10 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5131 Lja-Chr3 93654502 93656139 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5131 - - cam:101505811 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5131 3 93654502 93656139 Lja3g5131 3 93654502 93656139 ECH
Lja3g5131 3 93654502 93656139 Lja3g2083 3 24202404 24206733 PCT