Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g5046 ATGACCAACTACGGCACAATCCCCACCTCCTCTTCACCACCAACAACCAACCTCGAGTTCATCTCACGCGCCAAGACCAAGATCAAAGAAGGTCTCGGCACGCGCCGCCCATGGAAGCTCATGTTCAACTTCCGATCCTTCAACCTCCCCGCCGGCTTCGCCGACGCAATCTCGCGCGTGAAGATCAACATCGGTTACTTCCAGATGAACTACGCGCTCGTCGTGCTCCTTGTCATCTTCGTCAGCCTCATCTGGCACCCAATCTCGCTCATCGTGTTTCTCGCTCTCATGGCCGTCTGGGTCTTCCTCTACTTCCTCCGTGACGAGCCGCTGGTTATCTTCGGCCGCCTCATCAGCGACCGTGTTGTGCTTGTCCTCATGGCGATACTCACCGTCGGGCTGCTGCTACTCACCGGTGCTACCCTTAACATCCTCATCTCGCTGCTTGTTGGGGTGGTGCTCGTGGTGATCCACGCCGCGTTTAGGAGGACCGATGATCTGTTCGTGGATGAGGAAGAAGCTTATGGGTTCGCTCCCGCCGGTGGCTCCTCCGCCGCAGCGTCTTGA 567 0.5785 MTNYGTIPTSSSPPTTNLEFISRAKTKIKEGLGTRRPWKLMFNFRSFNLPAGFADAISRVKINIGYFQMNYALVVLLVIFVSLIWHPISLIVFLALMAVWVFLYFLRDEPLVIFGRLISDRVVLVLMAILTVGLLLLTGATLNILISLLVGVVLVVIHAAFRRTDDLFVDEEEAYGFAPAGGSSAAAS* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g5046 188 PANTHER PRA1 FAMILY PROTEIN F2 1 178 - -
Lja3g5046 188 Pfam PRA1 family protein 32 172 IPR004895 -
Lja3g5046 188 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 178 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g5046 Lja-Chr3 92626284 92627217 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g5046 K20359 - gmx:100526887 229.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5046 3 92626284 92627217 Lja3g5046 3 92626284 92627217 ECH
Lja3g5046 3 92626284 92627217 Lja3g1487 3 15929598 15931560 PCT