Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4975 ATGCAGATTCTCTCCAAAGCTTCAACTGCCATGGCCACCTTCCCTTGTTCTAGGATGAGAACTGGGTTTAGCGTGTGGCCGGATGTGAGACAGCTTTGCTTTAGAAAAGACTTTCTATACGGATTTATGAGGTTCTTTTCTACTCCGTTGAAAACACTGCGTGGGGGAGCTAGTCGCTCGCTCAGAGTGGCTCGGTTTTGCAGTGTTGCAAATATGTCTTCCTCGTTGCAGATTGAATTGGTACCTTGCCTGAGGGACAATTATGCATATCTTTTACATGATGTGGATACGGGTACAGTTGGTGTTGTTGACCCTTCTGAAGCTGTGCCTATCATAGATGCGTTGAGCAGGACAAAACGAAATTTGACATACATACTCAACACCCACCACCATCATGATCACACTGGTGGAAATGTGGAATTGAAAGAAAAATATGGAGCAAAGGTAATTGGTTCGGGAGCTGACAAGGAAAGGATCCCTGGGATTGATATCTATTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCATGTAATGGACACGCCTGGTCACACCCGAGGCCACATTAGCTTCTACTTTCCTGGATTTGGGGCAATTTTTACAGGAGACACTTTGTTTAGCTTATCATGTGGCAAGCTCTTTGAAGGAACCCCAGAACAGATGCTATCTTCTCTAAGCAAGATCATGTCTTTGCCAGAAGCTACAAGTGTATACTGTGGACACGAATACACATTGAGTAATACAAAGTTTGCACTGTCTATCGAACCTGAAAACAAGGAACTTCAAGCTTATGCTGCTCATGTAGCTTCCCTTAGAAATAAAGGCTTACCCACGATTCCAACCACGCTGAAGATGGAAAAGGCTTGTAATCCATTCCTCCGTACATCCAGTGCACAAATCCGGCAATCCTTAAAGATTGCAGCCACAGCAGATGATATAGAAGCCCTGGCTATCATACGGCAAGCAAAAGATAATTTTTAA 990 0.4404 MQILSKASTAMATFPCSRMRTGFSVWPDVRQLCFRKDFLYGFMRFFSTPLKTLRGGASRSLRVARFCSVANMSSSLQIELVPCLRDNYAYLLHDVDTGTVGVVDPSEAVPIIDALSRTKRNLTYILNTHHHHDHTGGNVELKEKYGAKVIGSGADKERIPGIDIYLNDGDKWMFAGHEVHVMDTPGHTRGHISFYFPGFGAIFTGDTLFSLSCGKLFEGTPEQMLSSLSKIMSLPEATSVYCGHEYTLSNTKFALSIEPENKELQAYAAHVASLRNKGLPTIPTTLKMEKACNPFLRTSSAQIRQSLKIAATADDIEALAIIRQAKDNF* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4975 329 Pfam Hydroxyacylglutathione hydrolase C-terminus 245 329 IPR032282 -
Lja3g4975 329 CDD hydroxyacylglutathione_hydrolase_MBL-fold 81 244 IPR035680 -
Lja3g4975 329 SMART Lactamase_B_5a 86 244 IPR001279 -
Lja3g4975 329 Pfam Metallo-beta-lactamase superfamily 89 244 IPR001279 -
Lja3g4975 329 SUPERFAMILY Metallo-hydrolase/oxidoreductase 76 329 IPR036866 -
Lja3g4975 329 Gene3D - 76 329 IPR036866 -
Lja3g4975 329 PANTHER BETA LACTAMASE DOMAIN 3 329 - -
Lja3g4975 329 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 3 329 - -
Lja3g4975 329 Hamap Hydroxyacylglutathione hydrolase [gloB]. 76 329 IPR017782 GO:0004416|GO:0019243
Lja3g4975 329 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 79 329 IPR017782 GO:0004416|GO:0019243
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4975 Lja-Chr3 91930975 91935232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4975 K01069 - gmx:100816314 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4975 3 91930975 91935232 Lja3g0591 3 5798783 5805581 PCT