Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4915 ATGGTAGTGTTGTCCAAACCAACAACAGAGCAATACTCCTACATCTTGAACTGCAAACCAACCACATTCTCCAACACAATACCTGTGGTTGACCTCTCCAAACCCGACGCAAAGACCCTCATAGTGAAGGCCTGCGAAGAGTTTGGATTCTTCAAGGTCATCAACCATGGTGTCCCCATGGAAACAATCTCCATGTTGGAGTCTGAAGCTAGCAAGTTTTTCTCCATGCCCCTCAATCAGAAGGAAAAAGCTGGACCACCCAATCCATTTGGTTATGGTACAAAGAATATTGGACAGAACGGTGATGTTGGTTGGGTTGAATATCTTCTTCTTACAAATAATCAAGAGTACAATTCCACCAGACTCTCCCCTGCTTTTGGCAAAAACAGAGACAAGTTCAGGTGTTTGCTGAGTGATTACATGTCCTCTGTGAAGAAAATGGCTGGTGAGATTCTTGAAGTGATGGCTGAGGGGTTGAACATTCAACAGAAGAATGTGTTCAGCAAGCTTCTAATGGATAAGGAGAGTGACTCTGTCTTCAGGCTCAACCATTACCCTCCATGTCCTGAGATGGCTTTGAATAGGTGTGAAAACGTGATGGGTTTTGGTGAGCACACAGATCCGCAAATCATTTCGTTGCTCAGGTCTAACAACACTTCTGGTCTCCAAATTTGTCTTCGAGATAGGACTTGGATTTCTGTGCCATCTGATCATAACTCCTTCTTCATCAATGTCGGTGATTCTCTTCAGGTTATGACTAATGGACGGTTCCGGAGTGTGAGGCACAGGGTTTTGGCAAATGGCTTCAAATCCAGACTCTCCATGATTTATTTCGGTGGTCCACCATTGAGTCAGAAAATTGCACCATTGCCTTGTCTCATGAAAGGGAATGAAAGCAGCTTATACAAAGAGTTCACATGGTATGAGTACAAGAAATCAGCTTATGCTTCAAGATTGGCAGACAATAGACTTGGCAACTTTGAGAGAATCACAGCGTCATAA 1002 0.4361 MVVLSKPTTEQYSYILNCKPTTFSNTIPVVDLSKPDAKTLIVKACEEFGFFKVINHGVPMETISMLESEASKFFSMPLNQKEKAGPPNPFGYGTKNIGQNGDVGWVEYLLLTNNQEYNSTRLSPAFGKNRDKFRCLLSDYMSSVKKMAGEILEVMAEGLNIQQKNVFSKLLMDKESDSVFRLNHYPPCPEMALNRCENVMGFGEHTDPQIISLLRSNNTSGLQICLRDRTWISVPSDHNSFFINVGDSLQVMTNGRFRSVRHRVLANGFKSRLSMIYFGGPPLSQKIAPLPCLMKGNESSLYKEFTWYEYKKSAYASRLADNRLGNFERITAS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4915 333 PANTHER GIBBERELLIN 2-OXIDASE 5 330 - -
Lja3g4915 333 SUPERFAMILY Clavaminate synthase-like 6 321 - -
Lja3g4915 333 Pfam 2OG-Fe(II) oxygenase superfamily 177 279 IPR044861 -
Lja3g4915 333 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 330 - -
Lja3g4915 333 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 175 281 IPR005123 -
Lja3g4915 333 Pfam non-haem dioxygenase in morphine synthesis N-terminal 27 114 IPR026992 -
Lja3g4915 333 Gene3D - 3 321 IPR027443 -
Lja3g4915 333 PRINTS Isopenicillin N synthase signature 241 267 - -
Lja3g4915 333 PRINTS Isopenicillin N synthase signature 205 226 - -
Lja3g4915 333 PRINTS Isopenicillin N synthase signature 41 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4915 Lja-Chr3 91206484 91209597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4915 27 327 Glycosyltransferase AT5G59530 26.284 4.77e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4915 K04125 - gmx:100819163 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4915 3 91206484 91209597 Lja3g4915 3 91206484 91209597 ECH