Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4907 ATGTCTCTGTTCAATGCTTCTTCCATCCCTATAGTTGGCAAGGATGCAGCTGGAATTGCTGGGAACATCTTTGCTTTTGGGTTGTTTGTATCCCCCATACCCACATTTAGGAGAATTATCAGAAATGGGTCAACAGAAATGTTCTCAGGGCTGCCATATATTTATTCCCTCATGAATTGTTTGATCTGCTTGTGGTATGGAACGCCTCTGATATCGCCTGATAATCTGTTGGTTACCACTGTTAATTCAATTGGAGCTGCCTTTCAGCTTGTGTACATAGTCCTCTTCTTGATGTATGCTGAGAAAAGAAGAAAGGTGAGAACTCTTGGACTACTGCTGGCAGTTTTGGGCGTTTTCGTGATCATACTAGTTGGGAGCTTGCAAATAGCTGATAGTACAGTGCGCCGAATGTTTGTTGGATTCTTGAGTTGTGCTTCTCTCATATCAATGTTTGCTTCTCCATTGTTTATAATTAAATTGGTCATTCGGACAAGGAGTGTTGAGTTTATGCCGTTTTATCTTTCGCTTTCCACCTTCCTAATGAGTGTTTCCTTCTTTCTTTATGGATTGCTCAGTGAAGATCCCTTCATTTATGTGCCAAATGGGATAGGAACTATTTTGGGAATGGTACAATTGCTATTATACTTCTATTACAAGAGATCATCTGATCAAGACTCTACAGAACCGTTGATAGCTTCATATGGATGA 708 0.4025 MSLFNASSIPIVGKDAAGIAGNIFAFGLFVSPIPTFRRIIRNGSTEMFSGLPYIYSLMNCLICLWYGTPLISPDNLLVTTVNSIGAAFQLVYIVLFLMYAEKRRKVRTLGLLLAVLGVFVIILVGSLQIADSTVRRMFVGFLSCASLISMFASPLFIIKLVIRTRSVEFMPFYLSLSTFLMSVSFFLYGLLSEDPFIYVPNGIGTILGMVQLLLYFYYKRSSDQDSTEPLIASYG* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4907 235 Gene3D - 137 229 - -
Lja3g4907 235 Gene3D - 13 106 - -
Lja3g4907 235 PANTHER RAG1-ACTIVATING PROTEIN 1 11 234 - -
Lja3g4907 235 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET2 11 234 - -
Lja3g4907 235 Pfam Sugar efflux transporter for intercellular exchange 138 221 IPR004316 GO:0016021
Lja3g4907 235 Pfam Sugar efflux transporter for intercellular exchange 18 103 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4907 Lja-Chr3 91152424 91161777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4907 4 234 Miscellaneous Gene Families AT3G14770 68.534 2.12e-110 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4907 K15382 - gmx:100790469 387.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4907 3 91152424 91161777 Lja3g4907 3 91152424 91161777 ECH