Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4884 ATGGTCAACTCTTTCATTCCCTTCCTTGTCCTCTCCCTCTTCCTTCTCCATTTCCCTCTCTATGCCGCAAACTTCCACAAGCTCAACCAACTCCAACCAGATTTTCTCGCTGAAGCCACATCCTCTGACGACACAGCACCACCAACTGAGTACTTTGAGGTAACCAGACCCATTGAACTCCCCGAAACAAAACCTTGTTCATACAACGTTCTCCACCATGATTTTGCCTACACATATGGCAAACCCCCAGTTCTTGCAGATTACACCCCTCCCTCTCAGTGCCCATCACAGAAATTCTCCAAGATCGTTCTTGAGTGGAAGTCAACGAGTAAAGGAAGGCAGTTTGATCGCATTTTTGGTGTGTGGCTTGGTGGGGTTGAGCTACTCAGAAGCTGCACAGCAGAGCCAAGAGCTACTGGAACTGTTTGGACAGTTCAAAAGGATATCACAAGGTACCATTCTCTTCTATTGAGTAACCAAACACTTGCTGTTTATCTGGGCAATATTGTTGATAAAACATATACTGGGGTTTACCATGTTGATATCACTATCCATTTTTACCCTGATGTTGAGTCAAAGTTTGCTGGTTTAGCATCTGGGAGTGGTTTCCCTGCGGATTTGATCTTGCCCATTTCGAGAAACCTTCGATTGAATGATGGGTTGTGGTTCCCTATTGTGAATTCTTCTGATGTAGGCTTGAAGGAGTTTAAGGTCCCTCAAAATGCTTATAGGGCTGTGTTGGAGGTTTATGTTTCATTTCATGAGAATGATGAGTCCTGGTATGCCAATCCTACAAATGAATATCTTTCTGTGAACAATCTTACTGATGCACCTGGGAATGGTCCATTTAGGGAGGTTGAGGTTACTCTTGATGGGAAGGTTGTTGGTGCAGTTTGGCCTTTTACTGTGATTTATACAGGAGGGGTCAATCCTCTCTTGTGGAGACCTATTACTGGGATAGGCTCATTTGATCTTCCATCCTATGATATTGAGGTTACACCCTTTTTGGGGACTATATTGGATGGACAAACCCATTCATTGGAGTTCAGTGTGACTAATGCGTTGAATGTTTGGTTTATAGATGCTAATTTACATCTTTGGTTGGACACAAAGAGTAGTAGAACCGAAGGAGAACTTGTGAGTCTTATTGACAAACCTTTGGTTGAATATCTAGTATCTGATATCAAAGGTTTAAACGGAACATTCTGGACTAGGGCACAGAGGTCCATTTTGTCTACTGGATGGGTAAAATCCTCCTATGGCAATATCACAACCAGTTTAGTACAAGATTTTGTTTTCCACAATAAATTGGTAATGGGGAAGAATGGGCGTAAGCAAACTGTGAAGCAAACGATTTATTTCAATGACACTGTCCATGCTAAACTTCCATCACCCCTTCTTGATTCTATTGAGGAAACACACAGAAAATTTTCCCTGTATTTGGCCTCAGATGAATTGGATCAGGATAATGATACTTATTTATCTGTTGAAAATGTTACACTGGGATTTGAAGAGAACAAGTCTAAGAGTGGAGATTTTGGATTTTCAAAGAGCTCTCTCAAAAACATGCAGGATGGCCAGGGCACTATGGTTGTTAGAAAGAATTTGGTTCTTAAGGGACAGGGTGAAACACATCAAGATTATGGATACACAAGCACTGGATATTGCTATTCTAGGAAAGTTGGCAGCTCAAATTACACAATTCTATATGATAAAATCAGAAATTCATGCCAGAAAAGAAGTCACCCTCATTTTGGCCTTAATTTTATGAAAAAGTTGCCCATTATGCTCTAG 1794 0.4119 MVNSFIPFLVLSLFLLHFPLYAANFHKLNQLQPDFLAEATSSDDTAPPTEYFEVTRPIELPETKPCSYNVLHHDFAYTYGKPPVLADYTPPSQCPSQKFSKIVLEWKSTSKGRQFDRIFGVWLGGVELLRSCTAEPRATGTVWTVQKDITRYHSLLLSNQTLAVYLGNIVDKTYTGVYHVDITIHFYPDVESKFAGLASGSGFPADLILPISRNLRLNDGLWFPIVNSSDVGLKEFKVPQNAYRAVLEVYVSFHENDESWYANPTNEYLSVNNLTDAPGNGPFREVEVTLDGKVVGAVWPFTVIYTGGVNPLLWRPITGIGSFDLPSYDIEVTPFLGTILDGQTHSLEFSVTNALNVWFIDANLHLWLDTKSSRTEGELVSLIDKPLVEYLVSDIKGLNGTFWTRAQRSILSTGWVKSSYGNITTSLVQDFVFHNKLVMGKNGRKQTVKQTIYFNDTVHAKLPSPLLDSIEETHRKFSLYLASDELDQDNDTYLSVENVTLGFEENKSKSGDFGFSKSSLKNMQDGQGTMVVRKNLVLKGQGETHQDYGYTSTGYCYSRKVGSSNYTILYDKIRNSCQKRSHPHFGLNFMKKLPIML* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4884 597 Pfam Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A 64 460 IPR021102 -
Lja3g4884 597 PANTHER PEPTIDE-N4-(N-ACETYL-BETA- GLUCOSAMINYL)ASPARAGINE AMIDASE A-LIKE 8 593 - -
Lja3g4884 597 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 8 593 IPR021102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4884 Lja-Chr3 90895084 90898023 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4884 - - gmx:100783515 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4884 3 90895084 90898023 Lja3g4884 3 90895084 90898023 ECH