Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4883 ATGGACAACACTTTCATTCCCTTCCTTGTCCTCTCCCTCTTCCTCCTCCATTTCCCTCTTTCTGCAGCAAATCTCCACAAGATCAAGCAACTCCGACCAGATTTTCTCGTTCAAACAACATCCTCAAACAACGACACAACACCACCCACTGAGTATTTTGAGGTAACCAGACCCATACAACTCCCCAAAACAAAACCATGTTCGTACAATGTCCTCCACCATGATTTTGCCTACACATATGGCAAACCCCCAGTTCTTGCAAACTACACCCCTCCCTCTCACTGCCCATCACAGAAATTCTCCAAAATCGTCCTTGAATGGAAGGCAACGTGTAAAGGAAGACAGTTTGATCGCATTTTTGGTGTTTGGCTTGGTGGGGTTGAGCTTCTCAGAAGCTGCACTGCAGAGCCAAGAGCCACTGGGATTGTTTGGACTGTTCAGAAGGATATCACAAGGTACCATTCTCTGCTATTGAGTAACCAAACACTTGCTGTTTATCTGGGCAATCTTGTTGATAATACTTATACTGGGGTTTACCATGTTGATATCACTATTCATTTTTATCCAATAGAGTCTAAGTTTGCTGGTTTAGCTTCTGGGAATGGTTTCCCTGCGGATTTGATCTTGCCCATTTCGCGAAACCTTCCACTGAATGATGGGTTGTGGTTCCCTATAGTGAATTCTTCTGATGTAGGCTTGAAGAAGTTTAAGATACCCCAAAATGCTTATAGGGCTGTGTTGGAGGTTTATGTTTCATTTCATGAGAGTGATGAGTTTTGGTATGCCAATCCTCCAAATGAGTATCTTTCTGCAAATAATCTTACTGGTACACCTGGGAATGGACCATTTAGGGAGGTTGTGGTTGCTCTTGATGGGAAGGTTGTTGGTTCAGTTTGGCCTTTTACTGTGATTTATACAGGAGGGGTCAATCCTCTCTTGTGGAGACCCATTACTGGGATAGGTTCATTTGATCTTCCATCCTATGATATTGAGATTACACCCTTTTTGGGGACTATATTGGATGGACAAACCCATTCATTTGGGTTCAGTGTGACTAATGCACTGAATGTTTGGTTTATAGATGCTAATTTACATCTTTGGTTGGACACAAAGAGTAGTAGAACAGAAGGAGAACTCCTGAATCTGATTGACAAGCCTTTGGTTGAATCTCTAGTATCTGACTTCAATGGTTTAAATGGATCATTTTGGACTAGTGCAAAGAGGTTTATTTTGTCTACTGGATGGGTCAAATCCTCCTATGGTAATATCACAACCAGTTTAGTACAACATTTTTCTTACCACAATAAGATGGTAATCGGGAAGAATGGGGATAAGCAAACTGTGAATCAAACGATTTTTTTCAATGACACTGTCCATGCTAAACCGCCATCACCCCTTGTTGATTCTGTCGAGGACACGCACAGAAAATTTTCCCTCTACTTGGGCTCAGATGAACTAGATCAGGATAACGATACTTACTTATCTGTTGCAAATGTTACATTGGGATTTGATGAGAACAAGTCTCAGAGTGGAGCTTTTGGAGTGTCAAAGAGCTCTCTAAAAAATGTGCAGGATGGCCAGGGTACTATAGTTGTTAGAAAGAATTTGGTTGTTAGGGGGCAGGGTGATACACAGCAAGATTATAGATATACAAGCACTGGGTACTGCTATTTTAGGAAAGTTGGCAGCTCAAATTACACAATCCTATATGATAAAATCAGAAATTCATGCCAGAAAAGAAGTCACCCTCGTCTTGGCCTTAATTTGTTCAAGAAGTTGCCCGTTATGCTATAG 1794 0.4147 MDNTFIPFLVLSLFLLHFPLSAANLHKIKQLRPDFLVQTTSSNNDTTPPTEYFEVTRPIQLPKTKPCSYNVLHHDFAYTYGKPPVLANYTPPSHCPSQKFSKIVLEWKATCKGRQFDRIFGVWLGGVELLRSCTAEPRATGIVWTVQKDITRYHSLLLSNQTLAVYLGNLVDNTYTGVYHVDITIHFYPIESKFAGLASGNGFPADLILPISRNLPLNDGLWFPIVNSSDVGLKKFKIPQNAYRAVLEVYVSFHESDEFWYANPPNEYLSANNLTGTPGNGPFREVVVALDGKVVGSVWPFTVIYTGGVNPLLWRPITGIGSFDLPSYDIEITPFLGTILDGQTHSFGFSVTNALNVWFIDANLHLWLDTKSSRTEGELLNLIDKPLVESLVSDFNGLNGSFWTSAKRFILSTGWVKSSYGNITTSLVQHFSYHNKMVIGKNGDKQTVNQTIFFNDTVHAKPPSPLVDSVEDTHRKFSLYLGSDELDQDNDTYLSVANVTLGFDENKSQSGAFGVSKSSLKNVQDGQGTIVVRKNLVVRGQGDTQQDYRYTSTGYCYFRKVGSSNYTILYDKIRNSCQKRSHPRLGLNLFKKLPVML* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4883 597 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 6 591 IPR021102 -
Lja3g4883 597 Pfam Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A 60 460 IPR021102 -
Lja3g4883 597 PANTHER PEPTIDE-N4-(N-ACETYL-BETA-GLUCOSAMINYL)ASPARAGINE AMIDASE A PROTEIN 6 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4883 Lja-Chr3 90892206 90894338 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4883 - - gmx:100785850 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4883 3 90892206 90894338 Lja3g4883 3 90892206 90894338 ECH