Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4861 ATGATGCTACGGTTCTCTCTTCCGCTTCACCTTCAGCTCCGCCACCACCACCAAACTTCGCTTCCTATCTCGGTAGCACCGGAACCATTCTTCCGACGACCCGTTCCTCGAACCGCCGCGCTCGGGTTGCGAGCGAGTTTCCGGGCCGGGGCCGGTTCTAGTTTGGGCTTGCTGGCGGCGGGTTATTCGGAAGATGAACCGGATGTGGAGCTGGGGCGGCTGCTGGGGCTGTTGCCGGAGGAGATGCGGCGGCGCGTGAGCGAACACCCGGAGGTGCAGCTGTTGATTGAAGTAGTGATGGATTTGGGTCGGAAGCCGCTGGCTAGGTTTCCCTCCGGTGATTTCGTGATATCGGATTATCCCATCACTGTTCAGGATATTGAACACGCCACTGCTCAGGTCGGTGACTTTGCTGTAGATAATCGAGCTGGAATTAGCAGGACATTGCATCGGATTAGTGCTATCAGAAATCGCAAGGGTGCAATTATTGGTCTAACTTGTAGAGTTGGCAGGGCAATATCTGGAAGTGCTAAGTTGTTGCAAGATTTGGTTCAAGATGGAGCTTCTTTGTTGCTAATTGGGCCTCCAGGGGTAGGCAAAACTACAATTATTAGGGAAGTAGCTCGGATGCTGGCAAATGATTACAAGAAGCGTGTGATGATTGTTGACACCTCCAATGAGATTGGGGGTGATGGTGATATACCTCATGGTGGAATAGGTACTGCTCGACGTATGCAGGTCCCCAACTCTGATGTACAACATAAGGTATTGATAGAGGCTGTTGAAAACCACATGCCACAAGTGATTGTAATTGATGAAATTGGTACAAAACTTGAAGCAATGGCTGCGAGCACAATTGCACAACGTGGGATCCAGCTTGTTGCCACTGCACATGGAATCACAATTGAGAATCTGATAATGAATCCTTCATTAGAGATGCTTGTTGGAGGAATACAGAGCGTGACACTAGGGGATGAAGAGGCCAGCCGCAGGGGTGTTCAGAAGACAGTACTGGAGAGGAAAGGCCCATCAACATTTAGTTGTGCAGTGGAAATTATTTCAAAGACAGAGTTGCGCATTCACCGGAGTCTTGAAGAAACTGTTGATGCTATTCTTTCTGGTCGTTTTCCTAATGTAGAAGTGCGCAAGCTGAAGTCTCAAGAACAGGAGGAGATTTTACAAAAAGGACCTGTTATTGACAGTTCTGTTGAACATGATGGTGAACTCATGTTTGAAGATGCTCCAGAGGGGGCTGATGACCAAACATGGCAAAATAATTCACCTTTGAGGTCGCCTATCGACATGGTAGAGGATTCCTGGGACCTCAGATTGCCACTTCGCCTGTTTTGTTATGGGATTTTAGAGGCAACAGTTATTCAAGGGATTAAACAACTGAAAATGAATGATGTGGCCCTTCAATTGACTGATAATATTAGTGAGGCAAATGCCTTACTTGCCTTGCAATCAAAGCTTAAGAAGAATTCAGGGATTCAAGCTGCTGCTAAATCTCATGATATTCCCATTTATGTGACAAAGACAAGTTCGGTGGAACATGTAACAAAAGCCATAAGAGCATTAGTAAGTGATCATGAAGATGGATTAAAGGGTTTTGCTTCAATGGATAGGATAAAACCATCAGAGAAAATTGACGCTCTGGAGGAGGCAAGAATAGCTATAGAGCATATAGTCATTCCAAAGGAAGAACCTGTGGATCTACTCCCAAGATCATCACACATATTATCTCTTCAGCTGGACCTTGTTCGCAGTTACCAACTAGAAGCGAGGAGAATTAGTGGAGACTCTGGTGTCTATCTGCGCATCCTTCCATCTCATTATGTGACTGATGAAGTGAAAACCAGTGAAGCTTCCGAGTTTGATGGTGAAGTTGATGATGAATTTGCCTCCACCAATGGCAGTGTCAATGGCACAGTCAACAGCTTGGGTAAATTGCCCCTACTGCCTGAGTAG 1968 0.4644 MMLRFSLPLHLQLRHHHQTSLPISVAPEPFFRRPVPRTAALGLRASFRAGAGSSLGLLAAGYSEDEPDVELGRLLGLLPEEMRRRVSEHPEVQLLIEVVMDLGRKPLARFPSGDFVISDYPITVQDIEHATAQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSAKLLQDLVQDGASLLLIGPPGVGKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHGGIGTARRMQVPNSDVQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCAVEIISKTELRIHRSLEETVDAILSGRFPNVEVRKLKSQEQEEILQKGPVIDSSVEHDGELMFEDAPEGADDQTWQNNSPLRSPIDMVEDSWDLRLPLRLFCYGILEATVIQGIKQLKMNDVALQLTDNISEANALLALQSKLKKNSGIQAAAKSHDIPIYVTKTSSVEHVTKAIRALVSDHEDGLKGFASMDRIKPSEKIDALEEARIAIEHIVIPKEEPVDLLPRSSHILSLQLDLVRSYQLEARRISGDSGVYLRILPSHYVTDEVKTSEASEFDGEVDDEFASTNGSVNGTVNSLGKLPLLPE* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4861 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 329 IPR027417 -
Lja3g4861 655 Pfam Sporulation stage III, protein AA 165 316 IPR045735 -
Lja3g4861 655 CDD AAA 187 276 - -
Lja3g4861 655 PANTHER KINASE-RELATED 64 612 - -
Lja3g4861 655 CDD R3H_AAA 550 609 IPR034081 -
Lja3g4861 655 SMART AAA_5 186 317 IPR003593 -
Lja3g4861 655 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 64 612 - -
Lja3g4861 655 Gene3D - 166 371 IPR027417 -
Lja3g4861 655 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 554 572 - -
Lja3g4861 655 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 194 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4861 Lja-Chr3 90679346 90687446 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4861 - - aprc:113864776 996.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4861 3 90679346 90687446 Lja3g4861 3 90679346 90687446 ECH