Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4855 ATGGAAGCTATTCTTCATGAGCACAACAATGCAATGCCAGCACGTGATGTTCTTGAAGTTCTTGCAGAGAAGTTCAGTGAATCACCTGATCGTAAAGGCAAGATTACAGTGCAGATGAAGCAAGTTTGGAATTGGTTTCAAAATAAAAGGTTTGCGATAAGGTCAAAATCAAGGAAGACTCCTGGAAATTTAAATATCACAGCTATGCCTCGGGATGATTCAGCCCCAGTCAGGAATATGTCTCAACCAATAGCTGCTCCAACTCTTGCTGCTCCAGGTTCAGTTCCAGCCACAGCAGAAGTTGCTCCAGAAAATTCAGTTATGGAATTTGAAGCTAAATCTGCAAGGGATGGAGCATGGTACGATGTGGCTAACTTTCTATCACACAGATATTTGGAGTCCAGTGATCCGGAAGTGCTGGTACAGTTTGCTGCTTTTGGACCTCAAGAAGATGAGTGGGTTAATGTTCGAAGGAATGTTCGGACACGCTCTCTACCCTGTTTATCATCAGAATGTGTTGCAGTCCTCCCTGGAGATCTTATACTCTGTTTTCAGGAACGTAATGAGCAAGCTCTTTACTTTGATGCCCGTGTCCGTGATTCTGAAAGACGGAGGCATGATGTAAGAGGCTGTCGTTGTAGATTTTTGGTTCGCTATGATCATGATCAGTCAGAGGAAATTGTGCCGCTTAGGAAGATTTGTCGCAGGCCTGAAACTGATTACAGACTACAGCAGCTTCATGCTGTGGGTGATTCAGCACATGTGGATCAGCAGAAGAGTGTCATGGATCCAAAGAAAGCTGAAACAACTGATGTTCAACCTGGAAATTCCACCATCATCCCATTCTCAGGGCCAGTCCAATACTAA 867 0.4418 MEAILHEHNNAMPARDVLEVLAEKFSESPDRKGKITVQMKQVWNWFQNKRFAIRSKSRKTPGNLNITAMPRDDSAPVRNMSQPIAAPTLAAPGSVPATAEVAPENSVMEFEAKSARDGAWYDVANFLSHRYLESSDPEVLVQFAAFGPQEDEWVNVRRNVRTRSLPCLSSECVAVLPGDLILCFQERNEQALYFDARVRDSERRRHDVRGCRCRFLVRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVGDSAHVDQQKSVMDPKKAETTDVQPGNSTIIPFSGPVQY* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4855 288 MobiDBLite consensus disorder prediction 270 288 - -
Lja3g4855 288 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 267 IPR039276 -
Lja3g4855 288 ProSiteProfiles 'Homeobox' domain profile. 1 56 IPR001356 GO:0003677
Lja3g4855 288 Gene3D - 105 166 - -
Lja3g4855 288 Pfam SAWADEE domain 108 234 IPR032001 GO:0003682
Lja3g4855 288 Gene3D - 168 239 - -
Lja3g4855 288 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 267 - -
Lja3g4855 288 MobiDBLite consensus disorder prediction 253 288 - -
Lja3g4855 288 SUPERFAMILY Homeodomain-like 7 59 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4855 Lja-Chr3 90609753 90616078 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4855 - - gmx:100785646 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4855 3 90609753 90616078 Lja3g4855 3 90609753 90616078 ECH