Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4854 ATGGGTCATATGACTCCTTACGTCCACCTCGCCAATGAGTTAGCAAAAAGAGGCCACAAGATCACATTTTTGCTACCAAACAAAGCACGACTCGCACTGCACCACCTGAACCGTTATCCAAACCTCATCACCTTCCACATCATCACCGTTCCAAACGTGGATGGCCTTCCTCTCGGCACCGAAACTGCTTCCGAGATCCCCCTTTCCCTGAACCACCTTCTAGTCGTAGCCATGGACAAAACACGTAACCAAGTGGAGCAAGTAATGAAATCAAAAAAACCTCACTTTGTGTTATTCGACGTCGCGTATTGGGTGCCAGAAGCCGCTAGAAAACTTGGTATCAAAACAATCTGCTACCATGTTGTTTCCGCAATGAGCATGGCTATGTCATTCGTACCTGCAAAGATTATTCCCAAGGACAGACCCCTCACGGTGGAGGACATGAGCCAACCACCGCCAGGGTACCCTTCCTCCTCAAACTCAAAACTAGTCCTTCGCCGCTACGAAGCAGAACAACAGATGTTCGCTTCTATTCCATTTGGAGAAGGTGGAGTTACACTTTACGACCGTACTACAACGGGTTTGAGAGAATGTGATGCCATTGCAATCAAAACAACCACAGAGGTTGAAGGTTGTTTCTGCGACTACATAGCAATTCAATATCATAAGAATGTTCTTTTAACTGGGCCAGTTTTATCTGAAGAGGCTGAGGGAGAAGAGTTAGAAGAACGTTGGGCCAAGTGGCTCGATGGGCTTGGGCTTGGGCTTGGGCTTGGGCTTGGACTTGGACCCGTTGTGTACTGTGCATTTGGGTCACAGGTAATATTGGGAAAGGCCCAATTCCAAGAGATACTGCTAGGGTTAGAGATTTCAGGTTGCGCAACCGTTGATGAGGCGTTGCCGGAGGGGTTTGAAGAGAGGGTGAAGGGAAGGGGAATGGTTTCGAGAGGGTGGGTCCCACGGTCGTTGATCTTGAAGCATGGTTCAGTGGGGTGCTTTGTGAGTCATTGTGGGCATGGTTCGATGTGGGAGTCTTTGATATTTGACAAGCAGATGGTGGTGGTCCCGCACATGGCTGACCAAGTGATGAATTCCAAGTTGGTTGTTGATGAGCTGGAAGTGGCAGTTGCGGTGGAAAGAGGGGAAGATGATGGGTGGGTTTCCAAAGAGGGATTGAGTGAAGCCATTAAGTCGGTGATGGAGGAAGGTAGTGAGTTGGGTGCCAGACTGAAAAACAACCAGGCCACGTGGAAGGAAAGGGGTTGGTGTCCAAAGGTATTAAATGGTTACATCGATAGAATTGTTCTAATTGTGTCCCATCTTGCTACAGGGGCAAACACTTCAGTAAAATCAATTCCATATTGTTGTGCATACCCTTTAGCAACTAGTCTTGCTTTATGCTTCTCAATCTCTCCTTTCTCATTGTACTTAGTCTTGTAG 1440 0.4771 MGHMTPYVHLANELAKRGHKITFLLPNKARLALHHLNRYPNLITFHIITVPNVDGLPLGTETASEIPLSLNHLLVVAMDKTRNQVEQVMKSKKPHFVLFDVAYWVPEAARKLGIKTICYHVVSAMSMAMSFVPAKIIPKDRPLTVEDMSQPPPGYPSSSNSKLVLRRYEAEQQMFASIPFGEGGVTLYDRTTTGLRECDAIAIKTTTEVEGCFCDYIAIQYHKNVLLTGPVLSEEAEGEELEERWAKWLDGLGLGLGLGLGLGPVVYCAFGSQVILGKAQFQEILLGLEISGCATVDEALPEGFEERVKGRGMVSRGWVPRSLILKHGSVGCFVSHCGHGSMWESLIFDKQMVVVPHMADQVMNSKLVVDELEVAVAVERGEDDGWVSKEGLSEAIKSVMEEGSELGARLKNNQATWKERGWCPKVLNGYIDRIVLIVSHLATGANTSVKSIPYCCAYPLATSLALCFSISPFSLYLVL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4854 479 PANTHER GLYCOSYLTRANSFERASE 1 435 - -
Lja3g4854 479 Gene3D Glycogen Phosphorylase B; 1 249 - -
Lja3g4854 479 CDD GT1_Gtf-like 1 404 IPR002213 GO:0008194
Lja3g4854 479 Gene3D Glycogen Phosphorylase B; 250 421 - -
Lja3g4854 479 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 419 - -
Lja3g4854 479 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 317 402 IPR002213 GO:0008194
Lja3g4854 479 PANTHER ANTHOCYANIDIN 3-O-GLUCOSIDE 2'''-O-XYLOSYLTRANSFERASE-RELATED 1 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4854 Lja-Chr3 90601675 90604712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4854 1 446 Glycosyltransferase AT5G54010 46.288 3.02e-148 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4854 - K17193 gsj:114416818 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4854 3 90601675 90604712 Lja3g4854 3 90601675 90604712 ECH