Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4852 ATGGCACTTCTGAGAGCTTCTTCTTTGTCCAAGCTTTTCTCCCATCGTAATCCATTGCTTTCTTCTTCTTCTCTTTCACCTCTTACATTGCACCACTGCACTCCCTCACCCTCTCTTCCTCCAATGCACTCCCTCACCGTCTCTGCCTCCCTTTCCACTTCCGACAACACCCCATCTCCAGACACAACAACACGCTCTCGCTGGAAACCCATGTGCCTGTACCACACGCAGGGAAAGTGCACCATGATGGATGATCTTATCCACCTTGAGAAGTTTAATCATGATTGCTCCAGGGAGCTTCAAGTGAACTCCGCTGAGTTAAACAAAATATGCCCTCAAAATCTAGACTTTTTCCTTGTGCTTGATTTAGAGGGTAAGGTGGAGATTCTTGAGTTTCCCGTTCTAAAGATTTGTGCAAAAACTTTGCAAGTTGAAGACATTTTCCACAGGTTTGTGAGGCCCACAGTCATGAGCGAACAAAGAATAAATGAATACATTGAAGGAAAGTATGGAAAATTTGGAGTTGATAGAGTTTGGCATGACACAGCCATACCATTCAAGGAAGTTATTCAAGAATTTGAAGCTTGGTTGATGCAACATCAGTTGTGGATGGGTGGGAAACTTAACCGTGCAGCATTTGTAACTTGTGGAAATTGGGATTTGAAGACAAAGGTCCCTCAGCAATGTGAAGTATCGAAGATAAAACTTCCTCCATACTTTGTGGAGTGGATCAATCTCAAAGATGTCTATCTGAACTTTTATAATAGGAGGGCCACGGGAATGGTTACAATGGTGAAGGAACTGCAAATACCATTAATGGGAAGTCACCATCTTGGCATTGATGACACAAAGAACATAGCAAGAGTCTTGCAACGCATGCTTATTGATGGTGCACTCATCCAGATTACTGCAAGGAGGAATCCTTCATCTCCTGGAAACGTCAACTTTCTTTTCAAGAACCGTATTAGATAG 972 0.43 MALLRASSLSKLFSHRNPLLSSSSLSPLTLHHCTPSPSLPPMHSLTVSASLSTSDNTPSPDTTTRSRWKPMCLYHTQGKCTMMDDLIHLEKFNHDCSRELQVNSAELNKICPQNLDFFLVLDLEGKVEILEFPVLKICAKTLQVEDIFHRFVRPTVMSEQRINEYIEGKYGKFGVDRVWHDTAIPFKEVIQEFEAWLMQHQLWMGGKLNRAAFVTCGNWDLKTKVPQQCEVSKIKLPPYFVEWINLKDVYLNFYNRRATGMVTMVKELQIPLMGSHHLGIDDTKNIARVLQRMLIDGALIQITARRNPSSPGNVNFLFKNRIR* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4852 323 MobiDBLite consensus disorder prediction 44 65 - -
Lja3g4852 323 PANTHER OS06G0353400 PROTEIN 16 323 - -
Lja3g4852 323 SUPERFAMILY Ribonuclease H-like 112 294 IPR012337 -
Lja3g4852 323 SMART exoiiiendus 117 299 IPR013520 -
Lja3g4852 323 CDD ERI-1_3'hExo_like 118 294 - -
Lja3g4852 323 Gene3D - 106 319 IPR036397 GO:0003676
Lja3g4852 323 PANTHER 3'-5' EXONUCLEASE ERI1-RELATED 16 323 - -
Lja3g4852 323 Pfam Exonuclease 122 290 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4852 Lja-Chr3 90581397 90584625 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4852 - - lja:Lj3g3v0428960.2 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4852 3 90581397 90584625 Lja3g4852 3 90581397 90584625 ECH