Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4848 ATGGATGATCCATCTCAGCTACTCCAAGCAGCTACTGATTTCGCCAATTACCCTGGTGTTCAAAGTGATGATTCTGCTAGGGACTTTCTCAATCGCTTTCCCCTCCCACTTATAATCAATGCATTACAGACTCAAGTTGATGTGCCTGGCCTAGAAAATACTCTAGTTGCGTGTCTTGAAAGCATATTCAAAACAAAGTTGGGTGCTTCTTTGATCCCTCAGTACATGCCTTTTGTTCAAGTCGGTCTGCAGGCAGATTCTCAAGCAGTCAGATCCTTAGCTTGCAAAACAGTCACTTGCCTTCTGGATAATCTTGATAATGATCACAAAGTTGCTGCTCATCTAATAGCGGAATTCAACATATATCCTCTTTTGCTTGATTGCCTTATCAAGGGCGATGAACAAGTGGCAGCTGTGGCAATGGATGCAATAATAAAATTAGCTGCTTTTCCTGAAGGCATGGGAATTATCTTTCCATCTGTCAAAGGAGGCCATACAGACCTTGGAATTATCGCATCACAATGTTCATCACTGGGTCGAGTTCGCGTATTGGCTTTAGTGGTGAAGCTTTTTTCTGTATCTAGGTCAGCAGCATCTACCATTTACAGTTTAAATCTACTTAAGTTGGTGGAAGCTGAAATCAGAAATGCTGATGATACCCTTGTAACTTTAAGTGTTTTGGAGCTTCTATATGAGTTAGCGGAGGTTGAGCATAGTACAGAATTTTTGTCAAAGACTAGCATCCTTCAGATTCTTTCATCTATAATTAGCAACAATTCTGTGGAATCAATTTTAAGATCAAGAGCGATGATGATAACAGGAAGGCTACTGTCCAAGGAAATTGTATACTCCTTCATAGATGAAGCTTGTGTTAAAATTGTCATTTCATCTATTGATGGTAGACTTCAGTCCATGGAACCTTCAGATAGAGATGAATGTGAAACTGCATTAGAATCATTGGGTCACATAGGATCATCTATCCAAGGAGCTACATTACTACTCTTGGGTTCATCACCTGCCGCTAGACATGTTATTAATGCAGCTTTTGATCGACAAGGACCACAAGGGCATGGTAAACAGCTGGCTGCATTGCATGCTCTTGGAAACATCTCAGGAGAACCCAGAACTGAGAATAACATCATACTCAATGCTGAGGCAGAAGAAAATCTGCGACGCTTGGTCTATGAAACTGCATCCAGGAGCTCAAAGCTGACACCATCGGGTCTTTTTCTGTCAGTTTTGCAGCAGGATTCAGAAATCCGTTTAGCGGGCTATAGAATGATAAGTGGATTGGTTGCTCGACCATGGTGCTTGTTGGAGATATGCTCAAGACAAGAGATTATAAATATAGTGACCAACCCAAGTACTGAGACCACAAAAATAGGTATGGAAGCTAGATATAACTGCTGCAAGGCGATAAGCAAATCATTGACGCTGTCTGGTAGGATTTCTGCTGATCCTGCTATTGCGGGAATAGCTACAAAGCTGCAGGAAGCTGTTGGAATGGGTCCATATCTTGTTAGAAAGCATGTTGAAGCCCAACCTATTGTGAAGACAGCTGAGAGATTTTAG 1572 0.416 MDDPSQLLQAATDFANYPGVQSDDSARDFLNRFPLPLIINALQTQVDVPGLENTLVACLESIFKTKLGASLIPQYMPFVQVGLQADSQAVRSLACKTVTCLLDNLDNDHKVAAHLIAEFNIYPLLLDCLIKGDEQVAAVAMDAIIKLAAFPEGMGIIFPSVKGGHTDLGIIASQCSSLGRVRVLALVVKLFSVSRSAASTIYSLNLLKLVEAEIRNADDTLVTLSVLELLYELAEVEHSTEFLSKTSILQILSSIISNNSVESILRSRAMMITGRLLSKEIVYSFIDEACVKIVISSIDGRLQSMEPSDRDECETALESLGHIGSSIQGATLLLLGSSPAARHVINAAFDRQGPQGHGKQLAALHALGNISGEPRTENNIILNAEAEENLRRLVYETASRSSKLTPSGLFLSVLQQDSEIRLAGYRMISGLVARPWCLLEICSRQEIINIVTNPSTETTKIGMEARYNCCKAISKSLTLSGRISADPAIAGIATKLQEAVGMGPYLVRKHVEAQPIVKTAERF* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4848 523 Gene3D - 2 404 IPR011989 -
Lja3g4848 523 SUPERFAMILY ARM repeat 36 475 IPR016024 -
Lja3g4848 523 Pfam Proteasome non-ATPase 26S subunit 59 512 IPR019538 GO:0043248
Lja3g4848 523 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATED 3 523 IPR019538 GO:0043248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4848 K06692 - gmx:100785671 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4848 3 90503879 90522268 Lja3g4848 3 90503879 90522268 ECH