Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4842 ATGGGAAGAATCTTTGCAGTGGAGCTGGAGGGTAGGTCATATGGTTGCAAGTCTTGCAAAACCCACCTGGCACTCGCAGATGATCTCATCTCTCGGGGATTTTATTGCCAGCGGGGAAAAGCATACCTCTTCAATAATGTTGTGAACTTCACAATTGGAGAGCTAGAGGAAAGGGCGATGCTTTCAGGATTGCACACCGTGGCAGATATTTTTTGCTGTTGCTGTGGACAAATAATCGGCTGGAAATATGAATCTGCTCATGAGAAGAGCCAAAAGTATAAAGAGGGGAAGTTTGTTCTTGAAAGAGGAAGGATTGTTGATGAAATTGATTTCTCCACTGAATTCCGCGTGGACAGCTGTATCAGCATGAGTGATTCTGAAGATGCTTAA 390 0.441 MGRIFAVELEGRSYGCKSCKTHLALADDLISRGFYCQRGKAYLFNNVVNFTIGELEERAMLSGLHTVADIFCCCCGQIIGWKYESAHEKSQKYKEGKFVLERGRIVDEIDFSTEFRVDSCISMSDSEDA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4842 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Lja3g4842 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
Lja3g4842 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 15 105 IPR004910 -
Lja3g4842 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4842 Lja-Chr3 90455761 90459416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4842 - - gmx:100305822 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4842 3 90455761 90459416 Lja3g4842 3 90455761 90459416 ECH