Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4827 ATGACTGTTGAGGTTGTGGGATTTGAGATGGTTCCAGGACCAGTGGAAAACATTGCTGAAGGAGAGAAATCTGTTTCTCATGAAACTGAAAATGGGAAATTGGAACAGGAGCCGGGAGCTGCAGAGCCCGTAAAATCTGGTTCAGATGGAAATGAAGCTGCTAAGGCCGAAGTTGATGGTGTTCCAGATTCCAGTGGCCCGAAAGATGCAACTGAAGAGTGGCCTGCACCTCAGCAGATACATTCTTTTTATTTTGTCAGGTTCCGGCCTTATGATGATCCCGACATTAAGTCCAAAGTTGATAAGCTTGATAAGGAGATTTACCTGACAAATCAAGCACGGTTTCAGATCACTGAAGCTCTAAAGGCGAAGCGGTCAGAGCGAGCAGAATTGATTTCTCAGATTAAGTCTCTCAGAGATGACAATAGGCAATTTCAGAGTATTGTGGATGAAAAAATAAAAGAGATTGAACCTCTGCAGCAAGCATTGGGCAAGCTGCGTAATGCGAACAGTTCAGGCCAGGGTGGACTATGCTCATCTGAGAAGGAACTTAATGACACTATATATAGCTTGCAATACCGCATACAGCATGAGAGCATTCCATTGACTGAGGAAAAACAAATCCTTCGTGAAATCAAACAGCTTGAGGGGACAAGGGATAAGGTTATTGCTAATGCTTCCTTGAGGGCCAAAGTGCAAGACTCTGTTGGGCCGAGAGAAGACATTCATGACCAGGTTAAGCTCATAGGTGGAGATTTGGATGGTGTGAAAAAAGAGAGGCAAGTCATCCGGTCCAAAATCAAGCAGCTCGATGATGCGCTGAAAGTCATAGACAGGGATCTCCAGTCTTTACAGGAAGAACTGGCAGCTGTAACTCAGAAGAGGGAAAAAGCTTTTGGGAGCATTCAGCAGCTAAGAAAACAACGTGATGAGGGAAACACTCATTTCTTCCAAAGTCGTACAATTTTGAGCAAAGCACGAGAGGTTGCAGCAAAGAAAGATATTGATGCTCTCGGGGAACTGTCACAGACAGAGGTTGAGAAATTTATGTCACTCTGGAACAGCGACAAATCCTTTAGGAATGACTATGAGAAAAGAATTTTGCCATCGCTGGATATGCGGCAGTTGAGTAGGGATGGTCGAATGAGGAATCCCGATGAAAGGCCATTGCTGGAAGAACCAAAACCTGCTGCAGAAACTGAAAAGTTACCGAAAAGCAGTGTGAAACAGCAGCCAAAGGAGGAGCCTAAAGCGCCTCCCCAAGAAACTCTGCCTGCCCCGAAGGTTCAGAAAGAAACCAAAAACAAAGGAAAAAATTTGAAACCCAGTCTGGCTATCAATGATGTAGAAGATGCTGATGAATATGAATATGAAAACCCGCACAAGGACGCTCCTGTCAAAGAGCCGGAAATTGATCCGGCGAAGTTGAAACAGATGAAAAGAGAAGAGGAACTAGCAAAAGCAAAGCTGGCCTTGGAAAGGAAGAAGAAGCTTGCAGAGAAAGCAGCAGCCAAAGCAGCAGCTAAAGCACAGAAGGAGGCTGAGAAGAAGCTTAAGGAACGTGAGAAGAAAGCAAAGAAATCGGGTCCCGGCTCTGCAGCTGCTCCGAACCCTGAGGAACCGGCAAATGAAGCGGTTGAGGTGGCAGAACAGGAGAAAGCTGATGATAAAGTCCAACCCTCAGCTCCGGTGAAGGAGAAGGCCGTGAAGGAGCACGTTGTTAGATCGAGGAGCCGAGCAAAAGCCCCTGAGGCCATTCCGAAAGCAATTCTCAAGAGGAGAAGGTCTAACGATTACTGGATATGGGTGGCATCTGGAGCCTTCTTCGCTGTGTTCATGTTGATGCTGGGATACATCCTTCTTTTCTGA 1869 0.4601 MTVEVVGFEMVPGPVENIAEGEKSVSHETENGKLEQEPGAAEPVKSGSDGNEAAKAEVDGVPDSSGPKDATEEWPAPQQIHSFYFVRFRPYDDPDIKSKVDKLDKEIYLTNQARFQITEALKAKRSERAELISQIKSLRDDNRQFQSIVDEKIKEIEPLQQALGKLRNANSSGQGGLCSSEKELNDTIYSLQYRIQHESIPLTEEKQILREIKQLEGTRDKVIANASLRAKVQDSVGPREDIHDQVKLIGGDLDGVKKERQVIRSKIKQLDDALKVIDRDLQSLQEELAAVTQKREKAFGSIQQLRKQRDEGNTHFFQSRTILSKAREVAAKKDIDALGELSQTEVEKFMSLWNSDKSFRNDYEKRILPSLDMRQLSRDGRMRNPDERPLLEEPKPAAETEKLPKSSVKQQPKEEPKAPPQETLPAPKVQKETKNKGKNLKPSLAINDVEDADEYEYENPHKDAPVKEPEIDPAKLKQMKREEELAKAKLALERKKKLAEKAAAKAAAKAQKEAEKKLKEREKKAKKSGPGSAAAPNPEEPANEAVEVAEQEKADDKVQPSAPVKEKAVKEHVVRSRSRAKAPEAIPKAILKRRRSNDYWIWVASGAFFAVFMLMLGYILLF* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4827 622 PANTHER PROTON PUMP-INTERACTOR 1-LIKE 24 621 - -
Lja3g4827 622 MobiDBLite consensus disorder prediction 21 35 - -
Lja3g4827 622 MobiDBLite consensus disorder prediction 496 528 - -
Lja3g4827 622 MobiDBLite consensus disorder prediction 496 580 - -
Lja3g4827 622 MobiDBLite consensus disorder prediction 546 580 - -
Lja3g4827 622 MobiDBLite consensus disorder prediction 374 416 - -
Lja3g4827 622 MobiDBLite consensus disorder prediction 374 480 - -
Lja3g4827 622 Coils Coil 476 527 - -
Lja3g4827 622 Coils Coil 253 301 - -
Lja3g4827 622 MobiDBLite consensus disorder prediction 455 480 - -
Lja3g4827 622 MobiDBLite consensus disorder prediction 1 76 - -
Lja3g4827 622 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 24 621 - -
Lja3g4827 622 Coils Coil 121 141 - -
Lja3g4827 622 SUPERFAMILY Tropomyosin 240 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4827 Lja-Chr3 90292083 90296959 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4827 - - gmx:100793229 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4827 3 90292083 90296959 Lja3g4827 3 90292083 90296959 ECH