Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4824 ATGAGTGGTGCACAACTGCAAAATGCTTCGGCTACCTTGACCTTAAAAGGGTCACAGCAAAATAAAAGTTCAGCAACTGAAGCTAGTGGTGTGGAGTCAAAGCCAAAGAAGAAAATATGCTGTGCTTGCCCGGACACTAAGAAACTGCGAGATGAATGCATCGTAGAGCATGGTGAAACAGCTTGTATGAAGTGGATTGAGGCTCACAAACAATGCCTCCGTGCCGAGGGATTCAATATTTGA 243 0.4486 MSGAQLQNASATLTLKGSQQNKSSATEASGVESKPKKKICCACPDTKKLRDECIVEHGETACMKWIEAHKQCLRAEGFNI* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4824 80 PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE 1 80 - -
Lja3g4824 80 MobiDBLite consensus disorder prediction 1 30 - -
Lja3g4824 80 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 40 80 - -
Lja3g4824 80 Pfam Cytochrome C oxidase copper chaperone (COX17) 36 80 IPR007745 GO:0005507|GO:0005758|GO:0016531
Lja3g4824 80 Gene3D CytochromE C oxidase copper chaperone 12 80 - -
Lja3g4824 80 SUPERFAMILY Cysteine alpha-hairpin motif 25 80 IPR009069 -
Lja3g4824 80 MobiDBLite consensus disorder prediction 1 34 - -
Lja3g4824 80 PANTHER CYTOCHROME C OXIDASE COPPER CHAPERONE 1 80 IPR007745 GO:0005507|GO:0005758|GO:0016531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4824 Lja-Chr3 90274938 90276348 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4824 K02260 - rcu:8273570 134.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4824 3 90274938 90276348 Lja3g4824 3 90274938 90276348 ECH