Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4816 ATGGCCACCGTGCTCGAATCCCTCGCCGTTCTCCCTCGCCCTTCCGCCACCGCCGCCGCCGTATTCTCCCCTCGCCGGAGCTACCCCAAGCTGCCGCAATACGCGGGTCTCAAGGCCAGACCCAGGCCCATCGCCTCCACTCGCCTCACTGCTTCGCCCGCCGCCGCTGCCAGAGTTGTTAATCGCACCGCACGCGTCGGCGTCGTGTGTGAGGCTCAGGATACCGCCGTTGAAGTGGCTTCTATTACTGATGCAAATTGGCAATCGCTTGTCCTTGAATCTGAATTTCCCGTTTTGGTTGAATTCTGGGCTCCATGGTGTGGTCCTTGCCGAATGATCCACCCCATAATTGATGAGCTTGCAAAGCAATATGCTGGGAAGCTCAAGTGCTACAAACTTAACACTGATGAGAGCCCTTCAACTGCTACTCGTTATGGCATTCGAAGTATCCCAACTGTTATGATCTTCAGGGATGGTGAGAAGAAAGATACTGTTATTGGTGCTGTGCCCAAGTCAACATTGACCTCGAGCATAGAAAAGTTCGTATGA 549 0.541 MATVLESLAVLPRPSATAAAVFSPRRSYPKLPQYAGLKARPRPIASTRLTASPAAAARVVNRTARVGVVCEAQDTAVEVASITDANWQSLVLESEFPVLVEFWAPWCGPCRMIHPIIDELAKQYAGKLKCYKLNTDESPSTATRYGIRSIPTVMIFRDGEKKDTVIGAVPKSTLTSSIEKFV* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4816 182 CDD TRX_family 85 179 - -
Lja3g4816 182 ProSiteProfiles Thioredoxin domain profile. 70 182 IPR013766 -
Lja3g4816 182 PANTHER THIOREDOXIN M-TYPE PROTEIN 2 182 - -
Lja3g4816 182 PANTHER GEO12009P1 2 182 - -
Lja3g4816 182 PRINTS Thioredoxin family signature 106 115 - -
Lja3g4816 182 PRINTS Thioredoxin family signature 146 157 - -
Lja3g4816 182 PRINTS Thioredoxin family signature 98 106 - -
Lja3g4816 182 SUPERFAMILY Thioredoxin-like 77 181 IPR036249 -
Lja3g4816 182 Pfam Thioredoxin 79 179 IPR013766 -
Lja3g4816 182 ProSitePatterns Thioredoxin family active site. 99 117 IPR017937 -
Lja3g4816 182 Gene3D Glutaredoxin 78 182 - -
Lja3g4816 182 TIGRFAM thioredoxin: thioredoxin 83 181 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4816 Lja-Chr3 90222948 90225236 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4816 K03671 - gmx:100818054 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4816 3 90222948 90225236 Lja3g4816 3 90222948 90225236 ECH