Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4809 ATGAGGGGTTCTTTAGGTGCAGTAATAGGTGGAAGATACCCATCAAGTGATGGAGTTACCCAAATGGGTGGAATCATAAGGCATGACAGGAAATGCAGAGACATCATTGTTCTTGTGATCTTTATAGCTTTTTGGATTGCAATGATTGTTAACTCCAGCTTTGGTTTCAACCAAGGAAACCCACTAAGGCTTACTTATGGGCTTGACTACAAAGGGAATGTGTGTGGGGACAAGCATGCGCACCCTGGTCTTCGTAAATTGGAGCTTAGATATTGGCAAAACCCTAATCAGGTTTATCAGAGTGGATTGAAGGATAGCCAATTTAAGCTTTCTGATGCCCGCAGTATATGCTTATCGGACTGCCCTGTGCCTGCGGATGATTCTCTTAACTGGGTGTGTGATTATCCTGAAGGAGATATTCGTCTTTCGATGGAAGATTGGATTAAAAGGAACTATGATTATTATGAGTTCCTTACACCAGAAATGAGAAACTCCTCTCTTAAACTTCAGGGCCCATGTTACCCTGTCATATTTCCGAGTGTAAATGTTTACTGGAGTTGCCAATTTATTGCTCGAGCATCAAATGCGTCTCTAAATCACTGGCAGCTGATGGGTGGAGATAACATCAATAAAGACATTCTTATTGATAAGTCCATTCACAAGGCTATTAATTCTCGGTCGGCTGTCTTAAAGAGGTACATGGCTGACATAGGAAAGGCGTGGCCTGTTCTGATTGTTTGTGGAGGGATTTTACCTCTTTTCCTGTCTGTGATTTGGTTGATGATGATTCGGCATTTTGTCGCTGCAATGCCATGGATAACAGTCGTGCTCTTTAATGTTCTAATGATATCAGTTACAATGTTCTACTATCTAAAAGCTGGATGGATCGGAAATGATGCTATTTCTCCCATCATTGGGGAGCATGACCCTTATATTAATGTATTCGGGAGAGAGCTGAGTCATCTACGTGTTGTCACTGTACTGATGACCTTTATCACAGTTGTTGCCATTCTTACTTCAATTGCTATTGTTCGACGCATCCTTATGGCAACATCTGTCCTGAAGGTTGCTGCAAAAGTGATAGGAGAAGTTCAAGCACTCATTATTTTCCCACTCATACCTTATGGTATCCTTGCTGTGTTTTACATGTTCTGGATTTCAGCTGCTCTCCATTTGTTCAGCTCTGGCCAGATTGTTCAGAATGACTGCAACTCTAACTGTTGCACATATGATCTCATGGCAAAACGGGTGAATTGTGATCGTTGCTGTGGATATAGCATTAAATACACACCTCATATCGGAGTTTCCATCCTTTTCCACTTATTTGGGGGCTATTGGGCTACACAATTTTTCATAGCATCCTCCTCAACAGTGATTGCTGGATCTGTTGCCTGTTATTACTGGGCTCATGGTGAAACATCGCCAGAAGTTCCATTTCTTTCAGTCTTTTCCTCTATGAAGAGACTTATGCGTTACAGTCTTGGATCTGTGGCCCTTGGTTCTCTGATTGTGTCATTTGTAGAATCAATCCGCTTTCTGCTTGAATCTATGCGTCGCAAACTAAAAGTCTCTAGTCATGGGTATGGGAGTTGGATAGGCAATGCTCTATACCAATCATCTCAATGTTTTCTCAGGTGTATTGAGTGGACCATCAAATCAGTAAACCGAAATGCTTACATCATGATTGCTATAACGGGCAAAAGTTTCTGCAGTGCTTCTTCTATTGCAACAGAATTGATCATGAATAACATTTTAAAGATAGGGCGCCTTAATGTAATTGGAGATATCATTTTGTTCCTTGGAAAATTATGTGTAAGCCTCTCGAGCGCGGTGTTTGCGTTCCTCATGTTGGACACACACAAGTACAGTTCAGACCATAACAAGACCTCATCTCCACTCTTTCCTGTTGTGATGTGCTGGGCTCTTGGATACATTGTTGCAACTCTCTTCTTTGCAGTTGTGGAGATGTCAATTGACACCATCGTTCTCTCATACTGCCAGGATTCTGAAGAACACCAAGGGACAGCTCAATATGCTCCACCCCTTCTCATCGAGACTCTTAGTGACCAAAATGAAATGCAGAGACTTACACAAGGACCCTAA 2103 0.4194 MRGSLGAVIGGRYPSSDGVTQMGGIIRHDRKCRDIIVLVIFIAFWIAMIVNSSFGFNQGNPLRLTYGLDYKGNVCGDKHAHPGLRKLELRYWQNPNQVYQSGLKDSQFKLSDARSICLSDCPVPADDSLNWVCDYPEGDIRLSMEDWIKRNYDYYEFLTPEMRNSSLKLQGPCYPVIFPSVNVYWSCQFIARASNASLNHWQLMGGDNINKDILIDKSIHKAINSRSAVLKRYMADIGKAWPVLIVCGGILPLFLSVIWLMMIRHFVAAMPWITVVLFNVLMISVTMFYYLKAGWIGNDAISPIIGEHDPYINVFGRELSHLRVVTVLMTFITVVAILTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPLIPYGILAVFYMFWISAALHLFSSGQIVQNDCNSNCCTYDLMAKRVNCDRCCGYSIKYTPHIGVSILFHLFGGYWATQFFIASSSTVIAGSVACYYWAHGETSPEVPFLSVFSSMKRLMRYSLGSVALGSLIVSFVESIRFLLESMRRKLKVSSHGYGSWIGNALYQSSQCFLRCIEWTIKSVNRNAYIMIAITGKSFCSASSIATELIMNNILKIGRLNVIGDIILFLGKLCVSLSSAVFAFLMLDTHKYSSDHNKTSSPLFPVVMCWALGYIVATLFFAVVEMSIDTIVLSYCQDSEEHQGTAQYAPPLLIETLSDQNEMQRLTQGP* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4809 700 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 4 698 - -
Lja3g4809 700 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 4 698 IPR007603 GO:0022857|GO:0055085
Lja3g4809 700 Pfam Plasma-membrane choline transporter 328 670 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4809 Lja-Chr3 90157835 90163439 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4809 K15377 - gmx:100803501 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4809 3 90157835 90163439 Lja3g4809 3 90157835 90163439 ECH