Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4779 ATGATGCTGAAAATAAAGATGGTGCAAAAAGTTGTGCAGGGTTTAACTTTTTTTTTGGAGTTATTGAGCAATTTTCTGCAGAAGAAGCAGCCTGGCCTGCAGAATAATAAGCAGCAGGTTATGGCGAAGGCGGTGGCGGTGGCGGAGGAGGCTGATGATGAGAGGTATGGGCTGAGCTGGAGGTTGGCGGTGGAGATGAACAATGTGCGGCCGTGGCGGACGGTCCCAGACCGGTGCTACAACCATGTGAAAAACTACATGACTGGTGGGCAGTATGAGAGGGACCTTCAACTTGTTACAGAACAGATTTTGCTGTATGCATCTGAGATAACACGCGCTGGTGATGGCTTTGATGCTTGGATTTTGGACGTTGATGACACTTGCATCTCTAACATGACTTACTACAGAGCAAGGAAATTTGGGTGTAAGCCATTTGATTCAGCGATATTCAAGGCATGGATCATGAAGGGAATCTGCCCAGCAAATCAGGCCATATTAGGATTGTTTAAGACATTGAAAGAGAGAGGATTCAAAGTGTTCTTGCTAACTGGTAGATACGAAGCAACACTCGGAAAAATCACCACTGACAACTTGCATAACCAAGGATTCATCGGCTATGAACGTCTTATTTTGAGGACTGAGCAGTATATAGGGCAAAGGGCAGTGAGATACAAGTCAGCGATTCGGAAGGAGATAGAAGGACAAGGATACAGGATATGGGGAAATGTGGGAGACCAATGGAGTGATCTTCAAGGAGAGTGTTTGGGTAATCGCACTTTCAAGATCCCCAATCCCATGTATCACATTTCTTGA 813 0.4551 MMLKIKMVQKVVQGLTFFLELLSNFLQKKQPGLQNNKQQVMAKAVAVAEEADDERYGLSWRLAVEMNNVRPWRTVPDRCYNHVKNYMTGGQYERDLQLVTEQILLYASEITRAGDGFDAWILDVDDTCISNMTYYRARKFGCKPFDSAIFKAWIMKGICPANQAILGLFKTLKERGFKVFLLTGRYEATLGKITTDNLHNQGFIGYERLILRTEQYIGQRAVRYKSAIRKEIEGQGYRIWGNVGDQWSDLQGECLGNRTFKIPNPMYHIS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4779 270 SUPERFAMILY HAD-like 101 268 IPR036412 -
Lja3g4779 270 TIGRFAM plant-AP: plant acid phosphatase 45 269 IPR010028 GO:0003993
Lja3g4779 270 Gene3D - 52 270 IPR023214 -
Lja3g4779 270 PANTHER PLANT ACID PHOSPHATASE 7 270 - -
Lja3g4779 270 PIRSF VSP 7 270 IPR014403 -
Lja3g4779 270 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 7 270 - -
Lja3g4779 270 CDD HAD_VSP 83 269 - -
Lja3g4779 270 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 48 269 IPR005519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4779 Lja-Chr3 89841024 89847020 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4779 - - gmx:102661443 383.259