Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4773 ATGACCAGGTTGGGAAAATTGCAAAAAGAGGAAGGGCAAAGGAGGAGTCCAAGAGTATGTGCATTGGAGGCTCCTTGCATGAGGCCTAACTTGGATAATAATGGTCAAGGACCGGCATCCCGTACTAGAGGAACCAAGAAGAAAAGACTGAGGCCACTTCAACATGGTGCAAAACATTCTTCTCATCAAAATGTTCAAAAGAGAAGTGCTATTGATCAACCGTCACAGCTACCATCTTCAACTCTTTTGCCCGAGAAGCGAATACTTGAACATGTCCTGGACACTTTACAAAGGAAAGACGCCTATGAAATATTTGCTGAACCAGTTGATCCAAATGAGGTTGAGGATTATTATACAGTCATTAAAGAGCCTATGGATTTTGCAACCATGAGGGCTAAACTACACGAAGGGATGTATAAGACTCTAGAACAATTTGAGGTGTGCATCTTTCATTTTATTTCACATGCTCATCATGACATGTTTCTAATATTCAACAATGCTATGAATTTTAATTCTGCCGGTACCATATACTTCAGGCAGGCTCGTTATATTAGTGAAGCAGCAAAGAAGGTTTTTGATGAATTAAAAACCAATCCTGAAAAGTTTGAAATGGAGAACTCAGAAACAAGGCGAAAAGTAGCTCGACGAAACCAAGGAGACTTTAGAGATTCAACAGGCATGAAATCCAATGAAAGAGTTGTTGATGAGCCCTCGAAAAATGCGCCGTGTTCTTCCCGTGGTACATCGAACCGGAAAAGTGTTAAGGCAAATCATGGATCTTCTGATAGTACTAAGCGTACTAAAGACAATAGCAGATGTAGAACTTCAGGTACTAAGGACAATAGCTGTAGAACTTTGGAGGTTGATAGGCGCTGTACTTATAAACCTTTGTCCCTTGATGAGGATGAATCAATATTTTCAACAACAGTTTATGATAAATTGAAACGGCTTGAGCATGTTAATCAGCAAGATATTGGTTACAAAGATAGCTTGATGATGTTTGTTAAAGGTTTAGGACCCACTGCACAAAATATAGCTAAAAGGAAACTACTTGGATGTGAAATTCATACGGCATCTACTGATTCTCCACTGAAGAAACCAAATCCTTTTAGCATAGGTACTACTTCTACCTTGATGTCTCAATATCCTAATGAGATGAGAGCCCATAGTGAAAAGATTGATATAAAGATTGCAAGTGGAGGGGAAAAAGTGCAAGGGACATTTAATGCTGAAAGAGAGAAAGGTTTTAGTCCCTTAGAGAGTAATGCTCAAGGAAATCAAAGGTGGTCTTTTGGGTGCAATAAAGTATTCCCAAATCAGAGATTTTGTCCTGATTTACACTATCCAGGTTATGACAATAAGGTTGGGATGATGATGTTATTGGAGAAATCGAAGACTGTTAATCAAGAAAACTTGTCAGGGTCAATTTTAGAGAACTCTCAAACAAAAGGGTTAGAATCAAGGTTGGAAAACAATTACAACTTTCAATCAAGTTCAAGACCTTGGCACTTAGAAAGTGGTGGTGTTTCATGTTTGGTTCAAGATAGAAGCCAATTGATGCAGAAATCAAGTTCAATGTGTGGACCTGGTGTTGGTCAAAATATAGAAGCACATTGTCCAACAAATGAGGTTGGTTGCTCATTTCAAGCCGTAAGAAGTTCAAAATCAGAACAATCTGTGCCACTGGCTTCCAATTTTGTTTTCAATCTTCCTTATTTGAAGACAAGACTTGATCAGATAAACTCCTCAGAACAGCCTAGGTTCTCACAGCAGGATTTGAGTGGCGGCAAGAACAGGCCCTTTTCTGCTCCAATGAGGTATCATCAGGGATTCTTGATCCGTGATCCTTCAAGTGATATGCAAACTACTCTTTACAGTCACAATCTACAGAAGTTTTGA 1899 0.3913 MTRLGKLQKEEGQRRSPRVCALEAPCMRPNLDNNGQGPASRTRGTKKKRLRPLQHGAKHSSHQNVQKRSAIDQPSQLPSSTLLPEKRILEHVLDTLQRKDAYEIFAEPVDPNEVEDYYTVIKEPMDFATMRAKLHEGMYKTLEQFEVCIFHFISHAHHDMFLIFNNAMNFNSAGTIYFRQARYISEAAKKVFDELKTNPEKFEMENSETRRKVARRNQGDFRDSTGMKSNERVVDEPSKNAPCSSRGTSNRKSVKANHGSSDSTKRTKDNSRCRTSGTKDNSCRTLEVDRRCTYKPLSLDEDESIFSTTVYDKLKRLEHVNQQDIGYKDSLMMFVKGLGPTAQNIAKRKLLGCEIHTASTDSPLKKPNPFSIGTTSTLMSQYPNEMRAHSEKIDIKIASGGEKVQGTFNAEREKGFSPLESNAQGNQRWSFGCNKVFPNQRFCPDLHYPGYDNKVGMMMLLEKSKTVNQENLSGSILENSQTKGLESRLENNYNFQSSSRPWHLESGGVSCLVQDRSQLMQKSSSMCGPGVGQNIEAHCPTNEVGCSFQAVRSSKSEQSVPLASNFVFNLPYLKTRLDQINSSEQPRFSQQDLSGGKNRPFSAPMRYHQGFLIRDPSSDMQTTLYSHNLQKF* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4773 632 MobiDBLite consensus disorder prediction 241 257 - -
Lja3g4773 632 MobiDBLite consensus disorder prediction 1 79 - -
Lja3g4773 632 ProSiteProfiles Bromodomain profile. 97 178 IPR001487 GO:0005515
Lja3g4773 632 PANTHER BROMODOMAIN CONTAINING PROTEIN, EXPRESSED 7 591 - -
Lja3g4773 632 PANTHER BROMODOMAIN CONTAINING PROTEIN 7 591 - -
Lja3g4773 632 MobiDBLite consensus disorder prediction 581 600 - -
Lja3g4773 632 MobiDBLite consensus disorder prediction 202 235 - -
Lja3g4773 632 MobiDBLite consensus disorder prediction 57 79 - -
Lja3g4773 632 SMART bromo_6 78 197 IPR001487 GO:0005515
Lja3g4773 632 SUPERFAMILY Bromodomain 75 204 IPR036427 GO:0005515
Lja3g4773 632 MobiDBLite consensus disorder prediction 581 597 - -
Lja3g4773 632 PRINTS Bromodomain signature 130 148 IPR001487 GO:0005515
Lja3g4773 632 PRINTS Bromodomain signature 100 113 IPR001487 GO:0005515
Lja3g4773 632 PRINTS Bromodomain signature 114 130 IPR001487 GO:0005515
Lja3g4773 632 PRINTS Bromodomain signature 159 178 IPR001487 GO:0005515
Lja3g4773 632 MobiDBLite consensus disorder prediction 202 281 - -
Lja3g4773 632 CDD Bromodomain 85 192 - -
Lja3g4773 632 Pfam Bromodomain 89 182 IPR001487 GO:0005515
Lja3g4773 632 Gene3D - 79 217 IPR036427 GO:0005515
Lja3g4773 632 MobiDBLite consensus disorder prediction 1 17 - -
Lja3g4773 632 MobiDBLite consensus disorder prediction 42 56 - -
Lja3g4773 632 MobiDBLite consensus disorder prediction 258 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4773 Lja-Chr3 89799995 89802931 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4773 K22184 - gmx:102667935 605.134