Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4717 ATGGTTTTTGTGCAGGTTTTTATATCTAAATCAATGACATCTTTATTACTAATGCTAGTTTTGCTATCAAGCACGGCATACTCAGCACACTCGGGGTCCGAGAATCCTATCAAGTCAGCTACTTTCTTATCTGAAAAGTTTGAAATAGGACCTGGAAGGGTTGTAGAGAAAGAACTTATAGATATTGAGATCCCAAGAGGGCATATTGGAGTCAAGAGTTTTGATGCTGAACTAGTTGATGAAGAAGGGAATCCTGTACCTTTGTATGAAGCATACCTCCACCATTGGGTCACTAATAAATACTTAGCAAAAAAGAATATTTCACGCAACTCTATGAATCCTCTTGAGGGTGCTATTTACGTAAGAAACGCAGGAACATGCACCGGGTTTATTCTTCCATATCATTGGGGTCATGGAGCTGAATCACGTGGAACACCGTCAAAACTTTTAGACCCTTTTGCAGTGGAATTAGGTAACCCTGCATCTACTCCATCTGAATATGAAGAGAAATGGCTCTTTAACATCATGGTCATTGATACACGTGGTGCAATAAATAAAGAATCTTGCACCCAATGCACATGTGAATCTTACGACCTCCCAAAAGATTTTTATAACACGACAAGGGATTTTCATGGGAAACTAGTGACCCCTGCTTATAAAGGAGGGATATTTTGTTGTAAAGATGGATTTCAATGCAAATTGAAAAAAGGTTTTCAAGCTCCAACTAGAAAGTTTTCCCTAAGATACAATATAACATGGGTTGATTGGAATGAATTCCAAGTTCCCGTTAAGTTTTATGTACTTGATGTGACCGATCGAGTGACAAGAAATGGTTCCCAAACAATCCATGCATGCCAGATTGATTATAGTATTCCAGCGACAAATGATGGTAGTAAGTATCACGTCGCGAAAGCTGACATACCGATAGAAAAAGGAGGTTATCTCATCTATTGCACCTCCCATATGCATGCAGGTGTTGTTAACGCAACTCTATATGGACAGGATGGGAGGACATTATGCACTTCAACACCAAAATATGGAACAGGAATGGAACCAGGAAATGAGAAAGGTTTCAATGTTGGAATGTCTGTTACTTATCCGGAACCCGGTTCGATCGAGATCAAGGATGGTGAAACTTTAACTTTAGAATCAAGATATGAAAGCGGCTTTCGCACAGGAGTTATGGGACAAATGTATATGTATTTAGCAGAAAAACTATCACAATGA 1227 0.3912 MVFVQVFISKSMTSLLLMLVLLSSTAYSAHSGSENPIKSATFLSEKFEIGPGRVVEKELIDIEIPRGHIGVKSFDAELVDEEGNPVPLYEAYLHHWVTNKYLAKKNISRNSMNPLEGAIYVRNAGTCTGFILPYHWGHGAESRGTPSKLLDPFAVELGNPASTPSEYEEKWLFNIMVIDTRGAINKESCTQCTCESYDLPKDFYNTTRDFHGKLVTPAYKGGIFCCKDGFQCKLKKGFQAPTRKFSLRYNITWVDWNEFQVPVKFYVLDVTDRVTRNGSQTIHACQIDYSIPATNDGSKYHVAKADIPIEKGGYLIYCTSHMHAGVVNATLYGQDGRTLCTSTPKYGTGMEPGNEKGFNVGMSVTYPEPGSIEIKDGETLTLESRYESGFRTGVMGQMYMYLAEKLSQ* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4717 408 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 7 408 IPR011692 -
Lja3g4717 408 PANTHER STRESS UP-REGULATED NOD 19-RELATED 7 408 - -
Lja3g4717 408 Pfam Stress up-regulated Nod 19 36 405 IPR011692 -
Lja3g4717 408 Coils Coil 403 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4717 Lja-Chr3 89275683 89277231 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4717 - - gmx:102664925 531.176