Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4715 ATGCTATTTGTACAGGTTTTTATATCTAAATCAATGGCATTTTTATTACCAATCCTAGTTTTACTATCAAGCACGGCATACTCAGCACGCTCAGGGTCCGAGAGTCCTATCAAGTCAGCTACTTTCTTATCTGAAAAGTTTGAAGTCGGGCCTGGAATGATCAAAGATATAAGTCTTGCACATATTGAGTTCCCAAGGGGACATATTGGAGTCAAGAGTTTTGATGCTGAACTAGTTGATGAAGAAGGGAATGCTGTACCTTTGCATGAAACATACCTCCATCATTTTTTCGTTTTAAAATACTTTGGAAAAAAGAATAATCCACTCTACCCTTTGAAGGATCATTTTGAGGGTGCTATTCCTGTAAGAAACGCAGGAACATGCAACGAGAATAGACTTTCATATTTTTGGGGTAAGGGAGCTGAGTCACGAGGAACGCCGTCAAAACTTTTAGACCCATTTGCAGTGGAATCAGGTAACCCTGCATCTACTCCATCTGGATATGAAGACAAATGGCTCGTTAACATCATGGTCATTGATACACGTGGTGCAATAAATAAAGAATCTTGCACTGAATGCACATGTGACGCTTTCCACATCCCAAAAGATTTTTATAAAAAGACAAGGGATTTTCATGGGAAACTACTGACCCCTGCTTATAAAGGAGGATTATTTTGTTGCCAAAATGGATTTCAATGCAAATTGAAAAAAGATTTTCAAGCCCCAACTAGAAAGCTTGCCCTAAGATACAATATAACATGGGCTGATTGGAATGAATTCCAAGTTCCCGTTAAGTTTTATATACTTGATTCAACCGATCGAGTGACAAGAAATGGCTCACAAACAATCCATGATTGCCAGGTTGATTATAGTATTCCAGCAACAAATGATGGTAGTAAGTATCATGTCATGAAAGCTGACATACCGATGGAAAGAGGAGGTTATCTCGTCTATTGCACCGCTCATATGCATGCAGGTGTTGTTAACGCAACTCTATATGGACAGGATGGAAGAACATTATGCACTTCAACACCAAAATATGGAACGGGAATGGAACCAGGAAATGAGAAAGGTTTCAATGTTGGAATGTCTGTTACTTACCCAGAACACGGTTCAATCAAGATCACGGATGGTGAAACTTTAACTGTAGAATCGAGATACGAAAGCGGCTTTCGCACAGGAGTTATGGGGCAAATGTATATCTACTTAGCAGAAAAGCTACAACAATGA 1230 0.3927 MLFVQVFISKSMAFLLPILVLLSSTAYSARSGSESPIKSATFLSEKFEVGPGMIKDISLAHIEFPRGHIGVKSFDAELVDEEGNAVPLHETYLHHFFVLKYFGKKNNPLYPLKDHFEGAIPVRNAGTCNENRLSYFWGKGAESRGTPSKLLDPFAVESGNPASTPSGYEDKWLVNIMVIDTRGAINKESCTECTCDAFHIPKDFYKKTRDFHGKLLTPAYKGGLFCCQNGFQCKLKKDFQAPTRKLALRYNITWADWNEFQVPVKFYILDSTDRVTRNGSQTIHDCQVDYSIPATNDGSKYHVMKADIPMERGGYLVYCTAHMHAGVVNATLYGQDGRTLCTSTPKYGTGMEPGNEKGFNVGMSVTYPEHGSIKITDGETLTVESRYESGFRTGVMGQMYIYLAEKLQQ* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4715 409 Pfam Stress up-regulated Nod 19 37 406 IPR011692 -
Lja3g4715 409 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 7 409 IPR011692 -
Lja3g4715 409 PANTHER STRESS UP-REGULATED NOD 19-RELATED 7 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4715 Lja-Chr3 89197532 89199083 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4715 - - gmx:106794488 507.294