Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4713 ATGATTTTTGTACAGGTTTTTATATCTAAATCAATGGCATCTTTATTACCGATACTAGTTTTACTATCAAGCACAGCATACTCAGCACACCCGGGGTCCGAGAATCCTATCAAGTCAGCTACGTTCTTATCTGAAAAGTTTGAGATAGGACCTGGAAGGATTGTAGAGAAAGCATTTATAGATATTGACTTTCCAAGGGGGCATATTGGAGTTAAGAGTTTTGATGCTGAACTAGTTGATGAAGAAGGGAATTCCGTACCTTTGCATGAAGCATACCTCCATCATTATTTCATTTTAAAATACTTAGCAAAAAAGAATGTTTCACGCGACCCTAAGGAACATTTTGTGGGTTCTATTCCTGTAAGAAACGCAGGAACATGCAACGGTAATATTCTTTCATATTTTTGGGCTAAGGGAGCTGAATCACGAGGAACACCGTCGAACCTTTTAGACCCATTTGCATTGGAATTAGGTAACCCTGCATCTATTCCATCTGGATATGAAGAGAAATGGCTCACTAACATCATGACCATTGATACACGTGGTGCAATAAATAAAGAATCTTGCACACAGTGCACATGTGAAGCTTACCACCTCCCAAAAGATTTTTATAACACAACAAGGGATTTTAAAGGGAAACTACTGACACCTACTTATAAAGGAGGATTATTTTGTTGCCAAGATGGATTTCAATGCAAATTGGAGAAAGGTTTTCAAGCCCCAACTAGAAAGTTTGCCCTAAGATACAATATAACATGGGTTGATTGGAATGAATTCCAAGTTCCCGTTAAGTTTTATGTACTTGATGTGACCGATCGAGTGACAAGAAATGGCTCACAAACAATCCATGATTGTCAGATTGATTATAGTATTCCAGCGACTAATGATGGTAGTAAGTATCATGTCGCGAAAGCTGACATACCGATAGAAAAAGGAGGTTATCTCATCTATTGCACCTCTCATATGCATGCAGGTGTTGTTAACGCAACTCTATATGGACAGGATGGAAGGGCATTATGCACTTCAACACCAAAATATGGAACAGGAATGGAACCAGGAAACGAGAAAGGTTACGCTGTTGGAATGTCTGTTACTTATCCGGAACCCGGTTCAATCAAGATCAAGGATGGTGAAACTTTAACTTTAGAATCAAGATATGAAATCTTTCTGGCTGTGACACTTGTCAGCCAGAGAGAGGGGTGGGAGGAAAATCATTATGAGAGTGTCATGTGTTAA 1236 0.3908 MIFVQVFISKSMASLLPILVLLSSTAYSAHPGSENPIKSATFLSEKFEIGPGRIVEKAFIDIDFPRGHIGVKSFDAELVDEEGNSVPLHEAYLHHYFILKYLAKKNVSRDPKEHFVGSIPVRNAGTCNGNILSYFWAKGAESRGTPSNLLDPFALELGNPASIPSGYEEKWLTNIMTIDTRGAINKESCTQCTCEAYHLPKDFYNTTRDFKGKLLTPTYKGGLFCCQDGFQCKLEKGFQAPTRKFALRYNITWVDWNEFQVPVKFYVLDVTDRVTRNGSQTIHDCQIDYSIPATNDGSKYHVAKADIPIEKGGYLIYCTSHMHAGVVNATLYGQDGRALCTSTPKYGTGMEPGNEKGYAVGMSVTYPEPGSIKIKDGETLTLESRYEIFLAVTLVSQREGWEENHYESVMC* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4713 411 Pfam Stress up-regulated Nod 19 36 387 IPR011692 -
Lja3g4713 411 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 7 387 IPR011692 -
Lja3g4713 411 PANTHER STRESS UP-REGULATED NOD 19-RELATED 7 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4713 Lja-Chr3 89182853 89186148 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4713 - - gmx:102664925 508.834