Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4654 ATGCAAAGCAGAAGAGCATTGCGGTTAGCAAAAACCGCAAAGCAGCTGAGTCTTCTTGACAGAACACTCTCTCTTTCTTCTGTCCCCCCACAACATCATCAAGATGATCATAACAACAACGTTTTGGTTGAAGGCAATGGCTGCTCCAGAATCGCCATTCTCAATAGACCCTCTGCTCTCAACGCTATCAACACCTCCATGGGGGCAAGACTGCATAAACTTTATAGAAGTTGGGAAGATAACCCTGATATTGGTTTTGTGATGGCGAAGGGCAGTGGCCGGGCATTTGCAGCTGGTGGAGATATTGTTGCCCTTTACCATTTGATAAACAAAGGGAAAATGGAAGCCTGTAAAGAATTTTTCAGAACAGTATATAGTTTTGTATACCTGATAGGTACATATATGAAGCCACATGTGGCTCTTCTGAATGGCATTACCATGGGTGGTGGAGCAGGAATTTCAATCCCTGGGACATTCCGGGTTGCAACAGATAAAACTAGGTTTGCTACCCCTGAAGTTCATATTGGATTCCATCCTGATGCTGGAGCATCTTTTTACCTTTCACATCTACCTGGTCACCTAGGAGAGTACTTGGCTCTGACAGGGGAAAAACTGAACGGAGTAGAGATGGTTACCTGTGGACTTGCTACACACTATTCGCTAATTGAAAGGCTTCCATTAATTGAAGAACAGCTGGGGAAATTGATTACTGATGACCCTTCTGTCATCGAAACCACTTTAGAACAGTATGGTGACCTTGTACACAAAGATAGAAGTAGCATACTACAAAGGCTTGAAATTCTGGACAAATGCTTTTGCCATGACACAGTTGAAGAGATTGTTGATGCTTTGGAAGTTGCGGCAAGTGAAACAAAGGACGCATGGTGCATTTCTACCCTAAACAGACTTAAAGAAGCTTCTCCATTAAGCTTGAAGGTTTCCTTGAGATCTATACGAGAAGGTAGATTTCAGACCCTTGATCAGTGCTTATCGCGCGAGTACCGTATGACTTTACAAGGAATATCTAAGCAGATATCTGGTGACTTCTGTGAGGGAGTGAGGGCACGTGTGGTGGACAAGGACTTGGCACCAAAGTGGGATCCTCCAACCTTGGAAAAGGTGTCTGAAGATATGGTAGATCAATATTTCTTACCTCTTAGTGAATTTGAACCTGATCTAGAGCTGCCCACAAAAGTTCGTGAAGCATTTTTGTAG 1215 0.4346 MQSRRALRLAKTAKQLSLLDRTLSLSSVPPQHHQDDHNNNVLVEGNGCSRIAILNRPSALNAINTSMGARLHKLYRSWEDNPDIGFVMAKGSGRAFAAGGDIVALYHLINKGKMEACKEFFRTVYSFVYLIGTYMKPHVALLNGITMGGGAGISIPGTFRVATDKTRFATPEVHIGFHPDAGASFYLSHLPGHLGEYLALTGEKLNGVEMVTCGLATHYSLIERLPLIEEQLGKLITDDPSVIETTLEQYGDLVHKDRSSILQRLEILDKCFCHDTVEEIVDALEVAASETKDAWCISTLNRLKEASPLSLKVSLRSIREGRFQTLDQCLSREYRMTLQGISKQISGDFCEGVRARVVDKDLAPKWDPPTLEKVSEDMVDQYFLPLSEFEPDLELPTKVREAFL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4654 404 CDD crotonase-like 41 218 - -
Lja3g4654 404 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 25 403 IPR032259 GO:0003860
Lja3g4654 404 Pfam Enoyl-CoA hydratase/isomerase 50 383 IPR045004 -
Lja3g4654 404 SUPERFAMILY ClpP/crotonase 40 369 IPR029045 -
Lja3g4654 404 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL 25 403 - -
Lja3g4654 404 Gene3D - 35 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4654 Lja-Chr3 88596117 88602444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4654 34 403 Miscellaneous Gene Families AT3G60510 63.797 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4654 K05605 - gmx:100801676 656.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4654 3 88596117 88602444 Lja3g4654 3 88596117 88602444 ECH