Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4642 ATGGATCCAGAGTTCTACCAAAACGTCGTCGTAATGAGGCACGGCGATCGCGTCGACGACGCCGAGCCTATGTGGTCAGCCAAGGCGACCCGTCCATGGGACCCGCACCTTGTTCAACCGGGTCGGGTCCGGGCATTCTCCACGGGTCGCAAGTTTCGTAAAACTCTCGGGTTCCCGCTTCATCGGGTCTTCGTCTCACCCTTCCTCCGCTGTGTCCAGACCGCCGCTGAAGTCGTCGCCGCCCTTTCCGCCGTCGGTGAAGATGAAGACCCCAACGCACTCACCGGTGACTCTGTCACCATCGATCCTTCTAAAGTTAAGGTTTCTGTTGAATATGGGTTATGTGAAATGATGAGCAGGGAGGCAATCAGGCTTGACGTTGCTCCTAAAGATGGAAATTGGGGTTTTGATATAGCAGAACGTGAAGCCATGCTTCCAGCCGGGACAGTGGATCGAAATGTACAAAGGATCTATAAAGAGTTACCCAAGTGGGAAGAGCCACATTCACGCACAAAGGCTAGATATGAGCAAATAGTTACAGACCTTGCAGATAAACATCCTACTGAGAATTTGCTGCTTGTCACACATGGGGAAGGTGTCGGGACAGCTCTTTCTTCATTCAAAAAGGGAACTCTGGTTTATGAAGTTATGTACTGTGGATACGTGGAGCTTAGACGCCCAATTTTCAAGAAGAATCAGTCGTTTACTGCTGGAGAATTCGAAGTACTTACGAATAATGGTCAAACTGGGGTAAGCTATTCCATAGAACAGCTCTCTGAGCAATGA 786 0.4987 MDPEFYQNVVVMRHGDRVDDAEPMWSAKATRPWDPHLVQPGRVRAFSTGRKFRKTLGFPLHRVFVSPFLRCVQTAAEVVAALSAVGEDEDPNALTGDSVTIDPSKVKVSVEYGLCEMMSREAIRLDVAPKDGNWGFDIAEREAMLPAGTVDRNVQRIYKELPKWEEPHSRTKARYEQIVTDLADKHPTENLLLVTHGEGVGTALSSFKKGTLVYEVMYCGYVELRRPIFKKNQSFTAGEFEVLTNNGQTGVSYSIEQLSEQ* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4642 261 PIRSF PRIB5 1 261 IPR012398 -
Lja3g4642 261 PANTHER - 6 256 - -
Lja3g4642 261 Pfam Histidine phosphatase superfamily (branch 1) 10 83 IPR013078 -
Lja3g4642 261 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 6 256 - -
Lja3g4642 261 Gene3D - 6 230 IPR029033 -
Lja3g4642 261 SUPERFAMILY Phosphoglycerate mutase-like 8 207 IPR029033 -
Lja3g4642 261 CDD HP 9 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4642 Lja-Chr3 88452707 88455784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4642 - - gmx:100811704 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4642 3 88452707 88455784 Lja3g4642 3 88452707 88455784 ECH