Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4631 ATGGCTGGAGCTGAAGGATTCGTGGAAGCCGATAATGCAGAGGCCATTATCGCCAGAATCGAACACAAATCGCGCAAGATCGAAAGCTTACTCAAACAGTATAAACCCGTTGAAGCCCTTAAAACTGCACTTGAAGGCACGTATGCTATGACTAGTGATGAGCGTTGCAAGTCAGCGCATTGGATTGCGGTGCATAGAGCTTTAATGGCTATAAAAGACGTGGATGGGATGCTTTCTTCCTTAGATCCTGAGTACTATGATATCCTAATGAAGTACCTGTATAGAGGCTTATCTACTGGAGATCGTCCAACATGCGACCAATGTCTTAGGATTCATGAAAAATTGACAGAGAAAGCTGGACTAGGTTGCATTCTACGTTTCTTGACTGATACTGTAAATACAGTATGA 408 0.4314 MAGAEGFVEADNAEAIIARIEHKSRKIESLLKQYKPVEALKTALEGTYAMTSDERCKSAHWIAVHRALMAIKDVDGMLSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILRFLTDTVNTV* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4631 135 Pfam ARP2/3 complex 16 kDa subunit (p16-Arc) 12 131 IPR006789 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Lja3g4631 135 PANTHER ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARC 5 133 IPR006789 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Lja3g4631 135 Gene3D - 16 132 IPR036743 GO:0005885|GO:0015629|GO:0030833|GO:0034314
Lja3g4631 135 PANTHER ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5 5 133 - -
Lja3g4631 135 SUPERFAMILY Arp2/3 complex 16 kDa subunit ARPC5 8 131 IPR036743 GO:0005885|GO:0015629|GO:0030833|GO:0034314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4631 K05754 - gmx:100809745 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4631 3 88354371 88359946 Lja3g4631 3 88354371 88359946 ECH