Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4624 ATGGGGATGGTCATGAGTTACATGGGACTAGGAGGAACAGCTGAAGGGTTAGTAGCCCAGAGTTTAAGTCTTGTATCAGGAGCCCTCTATAATCAATTTATGAAGAGAGAAATTAAAAACTTTGATGACTTCCACACTGCAATTCTTGATATCTTCAACACTATCAACATGGCCTTGCCCGGTAAACACTATGATGCACCAGAGCTCAAGGAAATCCAGGACTTGTTTGAACAATGGAATGAATCCAAGGAAGACAAAAAGAAGATTTTCACTGACTTCATGATCAAGAATGTGAACATCAGCAAAGCAGATGAGTCTATGATGATCACAGGGATAGTGGCACCTCCTGCAGCCATGGTCGTTAAGAAAACTGGTCAGTCTGTACCCCAGCTAAGTGTTATCAAAGCCATTCCTGATGTTATCTTTGTGCCCACAGCCACAATTTTGGCTCTCATTGCTGTTAAGCTCACCAAAAGAATGTCATTCAAGAAAGCTGCATCCTAA 504 0.4187 MGMVMSYMGLGGTAEGLVAQSLSLVSGALYNQFMKREIKNFDDFHTAILDIFNTINMALPGKHYDAPELKEIQDLFEQWNESKEDKKKIFTDFMIKNVNISKADESMMITGIVAPPAAMVVKKTGQSVPQLSVIKAIPDVIFVPTATILALIAVKLTKRMSFKKAAS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4624 167 PANTHER ION-BINDING PROTEIN, PUTATIVE-RELATED 19 163 - -
Lja3g4624 167 PANTHER CALCIUM ION-BINDING PROTEIN 19 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4624 Lja-Chr3 88291903 88293083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4624 41 148 EF-hand Containing Proteins AT1G64850 27.434 4.48e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4624 - - var:108347314 213.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4624 3 88291903 88293083 Lja3g4624 3 88291903 88293083 ECH