Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4623 ATGCACTTCTGGAACCTTGCTCTAGTTGCATTTCAACCAGTTCTTAAAATTTTCATCATTGGTGCTGTTGGAGGGTTCCTTGCAATTGATCGCTTTGACATACTTGGAGATAATGCCAAGAAGCACCTCAATTCTATGGTATATTTTGTCTTTACTCCAGCTCTTATTTGTAGCAGCCTGGCTCAAACTATAACTTTTAGGAGCATGGTTATGCTGTGGTTCATGCCGCTAAATGCTCTTCTAACATATGTTATTGGGATAGCTCTTGGATGGTTACTTATTAGAACAACTAGAGTACCTTATCATCTTCAAGGCCTTGTATTAGGGTGTTGTTCTGCAGGAAATTTGGGCACTTTGCCTCTTATCATAGTCCAAGCTATCTGTAAAGAAAGAGAAAACCCTTTTGGAGATGAGGATGATTGCATCCGTCATGGACTAGAATATACTTCTATAACAATGGCACTAGGACACATTTATGCTTGGTCTATTGTGTACAACATTGTCCGCATATATTCACCTAAGCCTAATGTTGTCAAAGTTGATGAATCCGCAGTAAATAAAGGAACTGATCCAGAGAACCTTTCAAAATGTTGTGCAGTGATCACAGCTGAGGACAAATCACAGCTTAATGATTACATTGGTCAACTTAAAATTGAACTTAAAGAGGCTAATGGAGAAGCAAAGGTACCAGAAAAGCCAAACATTATGAAACAGGTGAAAACATTAGCTGACAAGATCAACCTGAAGGTCCTATTTGCACCTTCATCATTGGGAGCGATTGCTGGTTTGTTAATTGGTGCAGTTCCTCAATTTCAAAAACTACTAGTAGGTCATAGTGCTCCTCTCGGTGTGATTCAAGATTCTGTAACTATGCTAGGGGATGCAAGCCTTCCAGCAATGATCTTAGTGGTTGGGGCACATCTTCTTAAGGGTTTAGAAGGATTTGGAAGGCAACTTCCACTTGTTGCTGGCATTATTGTGGTTAAATTGCTAGCCATACCAGCAATAGGTGTAGCAATTGTCAAAGGTGCAGTTCATTTCAGATTGATCCACCCTGATCCATTGTATCAGTTTGTTTTGCTGCTTCACTTTGCCCTTCCACCTGCAGTATCCGTGAGTACAATGACTCAGTTGATAGGAGTTGGTCAGAGTGAATGCTCAGTTATCATATGA 1173 0.4024 MHFWNLALVAFQPVLKIFIIGAVGGFLAIDRFDILGDNAKKHLNSMVYFVFTPALICSSLAQTITFRSMVMLWFMPLNALLTYVIGIALGWLLIRTTRVPYHLQGLVLGCCSAGNLGTLPLIIVQAICKERENPFGDEDDCIRHGLEYTSITMALGHIYAWSIVYNIVRIYSPKPNVVKVDESAVNKGTDPENLSKCCAVITAEDKSQLNDYIGQLKIELKEANGEAKVPEKPNIMKQVKTLADKINLKVLFAPSSLGAIAGLLIGAVPQFQKLLVGHSAPLGVIQDSVTMLGDASLPAMILVVGAHLLKGLEGFGRQLPLVAGIIVVKLLAIPAIGVAIVKGAVHFRLIHPDPLYQFVLLLHFALPPAVSVSTMTQLIGVGQSECSVII* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4623 390 PANTHER - 1 390 IPR045033 GO:0080162
Lja3g4623 390 Coils Coil 206 226 - -
Lja3g4623 390 Pfam Membrane transport protein 10 389 IPR004776 GO:0016021|GO:0055085
Lja3g4623 390 PANTHER EFFLUX CARRIER FAMILY PROTEIN, PUTATIVE-RELATED 1 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4623 Lja-Chr3 88279361 88289487 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4623 K24139 - gmx:100807081 462.996