Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4622 ATGGAGTTTTGGAAGCTATTCGTTGTTGCATTAATGCCTGTTCTGAAGGTGCTTTTGGTTACTGCTGTTGGGACATTCCTGGCACTTGATCGCTTTGACATACTCAACGAGACCGCCAGGAAACACCTGAATACTATGGTATTTTTTGTCTTCGCTCCTACTCTTGTTTGTAGCAGCCTAGCTGAAACAATAACCTTTAAGAGCTTGGTTATGTTATGGTTCATGCCGGGGAATGTTCTTCTGACATTTATAATCGGTACGGTTCTTGGATGGTTACTACTCAAAACAACTAGAGTTCCTCATCATCTTCAGGGCCTTGTGTTGGGGTGCTGTGCTGCAGGAAATCTAGGAAATTTACCTCTTATTATTGTCCCAGCTGTATGTAAAGAAAGAAGCAATCCTTTTGGAGATGTGGGTGTTTGCTATAGAAATGCTCTAGCATATGCTTCTTTATCAATGGCACTAGGATCAGTTTACACTTGGTCTTATGTGTACAACATTATCCGCATATATAATTCAAGCAAGATCTCCAATGAAGTCAACCTTGATGATTCCCTGAAAAGTCATCCAGAAAACATTTCAACATGTTCTGCAGGAGCATTGGTTACTACCCAGGATGGATTACAGACTGATCAGGTGAAGCAGCTTGAAATTGAATGTACAATGCCTGTTGAGCCAGCAGAGGTGCGCAAAAGTGGGAAAATTATGAAACAACTGAAAATATTAGCTGAAAAGATCAATCTGAAGGTATTGTTTGCACCTGCAACGACCGGAGCGATTGTTGGTTTAATAATTGGTGCAGTTCCTCCATTTCGAAATCTATTAGTTGGTGACAATGCTCCTCTCCGTGTGGTTGAAGACTCGGTAATTATGCTAGGAGCTGCAGGCATTCCAGCAATGACATTGTTGGTTGGGGCAAATCTTATTAAGGGTTTAAAAGGAGTAAGGAAGCAGCTTCCAGTTATTGTTGGCATTGTTGTGGTTAGATTTATTGCCTTGCCAATAATAGGCATAGGCATTGTTAAAGGTGCAGTGCATCTTGGATTGATCCACAATGATCCATTGTACCAGTTTCTTTTGCTGCTTCAATTTGCCCTTCCACCTGCAGTAGCTATCAGTACAATCACTCAATTATTTGGAGCTGGTGAGGGTGAATGCTCAGTTATCATGTTAGCAACTTATTCTTGTTCTGCAGTTTCACTTACACTTTGGTGCACCTTCTTTATGTGGCTTGTATTATAA 1242 0.4098 MEFWKLFVVALMPVLKVLLVTAVGTFLALDRFDILNETARKHLNTMVFFVFAPTLVCSSLAETITFKSLVMLWFMPGNVLLTFIIGTVLGWLLLKTTRVPHHLQGLVLGCCAAGNLGNLPLIIVPAVCKERSNPFGDVGVCYRNALAYASLSMALGSVYTWSYVYNIIRIYNSSKISNEVNLDDSLKSHPENISTCSAGALVTTQDGLQTDQVKQLEIECTMPVEPAEVRKSGKIMKQLKILAEKINLKVLFAPATTGAIVGLIIGAVPPFRNLLVGDNAPLRVVEDSVIMLGAAGIPAMTLLVGANLIKGLKGVRKQLPVIVGIVVVRFIALPIIGIGIVKGAVHLGLIHNDPLYQFLLLLQFALPPAVAISTITQLFGAGEGECSVIMLATYSCSAVSLTLWCTFFMWLVL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4622 413 PANTHER - 1 412 IPR045033 GO:0080162
Lja3g4622 413 Pfam Membrane transport protein 10 404 IPR004776 GO:0016021|GO:0055085
Lja3g4622 413 PANTHER EFFLUX CARRIER FAMILY PROTEIN, PUTATIVE-RELATED 1 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4622 Lja-Chr3 88261440 88277485 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4622 K24139 - gmx:100797947 572.392