Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4621 ATGAGTGAAGAGTTTGATTCTAAAGGAATGGCTATGGATCTCTTGCATCAATTGGAGGACATCCTTGAATCTGATGCTCTAATAGATGAGCTGGGGTTTATTCATCCATCCCAGTTTTCCGTGTTGAATGAAGAATCAGGTGTTTCAACTAATTTATCTGATGAAGCTATCCATCAATCAACAAACAGTTTACCAAGCTCTGAGGGATGTTCCAAACAAGAGAACCTATACTTCTGGAACAGAGATCATAAATTGGGAATTTCAACTCGTGCTATTGTACCATTATATAGAGCTGCTAAACATGCATTTATGACTACATTAAACCAATACAGGAAGTGTGGCAAACAATCTGACAAGGTTGTAAGTTGTTTACCAGCCTCTGCATCCTGTGACCATCTTGAGAGTATACTTTTGAGACACAGCAGGTCTCTTCTGCTGCTAAGCTGTGATTTTATGACTGCTTGGAATTGTAGAAAATTAGTAGTGTCCCTGAAGAAGCAGGTTTCAATGTTTGTAGATGAACTTCTACTGTCAGAACTTGTGCTCTCACATTCACCCAAAAGTGAACAAGCTTGGAATCATAGGCGGTGGGTGATCAAGTCAATCTCCACAAACTGTTCAAATTTCAAAGAGATTTTGGGAAAAGAATCTGAGCTGGTGGAAAAAATAGCTGAGAGATCAAAGATGAATTATCGTGCATGGAATCACCGTTGCTGGTTAATCTCATACATGACTACAGGACAGGTTCTGGATGAATTGAAGAAATCCAGAAGTTGGGCAGCGCTGCATGTTGCTGATAATTGTGTTTTTCATTATCGCCAACGGCTATTGCAGAAGATTATGGATGACCGAAGTGGTGTGGAAGAAACTGCATCTTATGGTTATGGTGCTGATATTTCCCAAGCCTTGAAGGATGAACTTGATTGGAATCAAACATTGATTAAGCGTTATGTCGGTAGAGAGGCTCTATGGCTTCATCGACGGTTCCTTTCCACGTGTTGGATAAGTAATTTTCTAATTGATTCTGGTGATGGCAAGGAGAAAATTGGCATGTATCATGACTTTGGAACCTTTATACAGAATGAGTTATCTCTCCTTCACTCCAGCACAGCTTTTACTGATGATGATTTTGCGGATTTCCAAGCACAAGCCTCATATTCTGCTAGTTACATGCTATGGCTGAAAGTGCAAGTCCCCAAGCCTCTGCAAAATGAGTTCCTTGAGAAGATAAGAGATGTAGATTTGAAGACCTTGCTGGATAAGTTATGCCCAGAGAGATCCTCACTATTCAATTACTTCATCAGCTAG 1308 0.4021 MSEEFDSKGMAMDLLHQLEDILESDALIDELGFIHPSQFSVLNEESGVSTNLSDEAIHQSTNSLPSSEGCSKQENLYFWNRDHKLGISTRAIVPLYRAAKHAFMTTLNQYRKCGKQSDKVVSCLPASASCDHLESILLRHSRSLLLLSCDFMTAWNCRKLVVSLKKQVSMFVDELLLSELVLSHSPKSEQAWNHRRWVIKSISTNCSNFKEILGKESELVEKIAERSKMNYRAWNHRCWLISYMTTGQVLDELKKSRSWAALHVADNCVFHYRQRLLQKIMDDRSGVEETASYGYGADISQALKDELDWNQTLIKRYVGREALWLHRRFLSTCWISNFLIDSGDGKEKIGMYHDFGTFIQNELSLLHSSTAFTDDDFADFQAQASYSASYMLWLKVQVPKPLQNEFLEKIRDVDLKTLLDKLCPERSSLFNYFIS* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4621 435 PANTHER PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 25 395 - -
Lja3g4621 435 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 212 246 IPR002088 GO:0008318|GO:0018342
Lja3g4621 435 Pfam Protein prenyltransferase alpha subunit repeat 173 200 IPR002088 GO:0008318|GO:0018342
Lja3g4621 435 Pfam Protein prenyltransferase alpha subunit repeat 216 244 IPR002088 GO:0008318|GO:0018342
Lja3g4621 435 Pfam Protein prenyltransferase alpha subunit repeat 303 330 IPR002088 GO:0008318|GO:0018342
Lja3g4621 435 SUPERFAMILY Protein prenylyltransferase 82 336 - -
Lja3g4621 435 Gene3D Protein prenylyltransferase 98 418 - -
Lja3g4621 435 ProSiteProfiles Protein prenyltransferases alpha subunit repeat profile. 170 204 IPR002088 GO:0008318|GO:0018342
Lja3g4621 435 PANTHER PROTEIN PRENYLTRANSFERASE ALPHA SUBUNIT REPEAT-CONTAINING PROTEIN 1 25 395 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4621 K14137 - gmx:100807426 666.381