Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4608 ATGGCTTCCACGGCTGTCGCCACCGCCGGAAACGACGAACCACCACCGCCGCCGCAGCAGCCAACGGATCCTTCCTCGTCCTCCACTGTTGATCGGAGCGATTCCTCCAATTCCTCGCCCAATCATATCGCAGATACTGAAATTCAGTTTCTGTCTCCAGATGCATTGAAGAGCGAAGAGTATCGTCAATTGTTTCGTCTTCCACCGGAGGAAGTCCTTATTGAAGATTTTAATTGTGCCATCCAGGAAAACATACTTATTCAGGGTCATTTGTACGTCTTTGTCAACTTTATTTGTTTCTACTCGAACATCTTTGGATTTGAGACCAAGAGAATAATCCCATTCCCCGAAGTCACGTGTATACGGAGGGCAAAGACAGCTGGGCTCTTTCCCAATGCCATTGAAATTCTTGCTGGAAGCAGGAAGCACTTCTTTGCATCCTTCCTATCACGTGATGAAGCTTTCAATATTATTAACGATGGATGGTTGCGGCAGGGCAATGATGCTAGTGCAATTACAGAACAGCAGGAAACAATATCTGAGTCCAGCAGCCAAGAGAATGGATTTATAACTGTTGAAACTGTCAAAAGTTCCAATACACTTGACAACGAGTCACTTTCTACAGACCCGAGCACAGATACTTCCAGGTGCAAAGACTTGGGGCTTCCATCCATTGGAGAGGACCCTGTATTAGTGACGGTTCCAAAGAAACAATCCAGTGTTAAACAGGTTGCTGTACCTGAATTGAACAATGATTCCCCAAGCATGAGTCGGAACTGGAATGAGGAGGATATTGATGCTCCAACAACCGCAGAAGCTTATACATGTGTTGCAGAATCAACGTTTCCGATAGAGGTTGAAGCCTTCTTTAGGTACTTTTTCTCAGATGATGCTGTAAATTTTCATGGGTCTTTTCATAAAAGATGTGGTGATAAAGACTTCAAGTGTGCTTCATGGTATCCTCAGGAGAAATTTGGGTATGCTCGCGAACTGTCATTTCAACATCCAATAAAAATTTATCTTGGAGCAAAATTTGGTTGTTGCCGTGAGGTCCAGAAATTTCGAGTTTACAGAAACAGTCACCTGGTTGTAGAGACATCCCAAGAAATCAGTGATGTACCTTACGCAGATTATTTCCGTGTTGAGGGATTGTGGAGTGTAAAGAGAAACATGGACAAACCAAAGGAATGCTGCATATTACGGGTATATGTGAATGTGGCATTTTCTAAGAAAACTATGTGGAAAGGCAAAATAGTACAGTCAACAATTGAAGAATGCCGAGAGGCTTATGCGACTTGGATCAACATGGCACATGAGATGTTGAAGCAGAAGAACCTTGAAAAACAAGAAAATGGTCTCATTGCTGCTGCAGTTCCAAACGGCAAATTGAATTTTGATAGAGAAGCCAAGACTGGCGAATCTTCAGAAGGGTCACAGGAGCAAAGTAACCCCACAAGTAGACAAGCTCAATCAAATGTCGTTGACCCGTCAGTTGTTCCATCTATGTTCAAAGAATTAACGACAAAGTTCAGGTCATCTTTGAAAAGCCAGAGCAATCTTTCCCTGCTCCTTGTTACCATTTTCGCTCTGATTTTCTTCATGCAGCAGTTTAGCATACTTGTGCTATTGGCCAGACCTCAACACGTACATGTCAACACTCCTATAGACTTTATGAATAGGATGGAAAATGGAGCGTCTAGAAGTGCTTCAGACGTAGCGTGGATGGAGAAAAGAATTCACCACCTTAAAGATGAGATGTACATGGTTGAGACTAGACTTGAAAGAATGCGGAATGAGCATGCGCTCTTGAAAAAGCAACTACAAGATCTAGAACAGAAATAG 1842 0.4294 MASTAVATAGNDEPPPPPQQPTDPSSSSTVDRSDSSNSSPNHIADTEIQFLSPDALKSEEYRQLFRLPPEEVLIEDFNCAIQENILIQGHLYVFVNFICFYSNIFGFETKRIIPFPEVTCIRRAKTAGLFPNAIEILAGSRKHFFASFLSRDEAFNIINDGWLRQGNDASAITEQQETISESSSQENGFITVETVKSSNTLDNESLSTDPSTDTSRCKDLGLPSIGEDPVLVTVPKKQSSVKQVAVPELNNDSPSMSRNWNEEDIDAPTTAEAYTCVAESTFPIEVEAFFRYFFSDDAVNFHGSFHKRCGDKDFKCASWYPQEKFGYARELSFQHPIKIYLGAKFGCCREVQKFRVYRNSHLVVETSQEISDVPYADYFRVEGLWSVKRNMDKPKECCILRVYVNVAFSKKTMWKGKIVQSTIEECREAYATWINMAHEMLKQKNLEKQENGLIAAAVPNGKLNFDREAKTGESSEGSQEQSNPTSRQAQSNVVDPSVVPSMFKELTTKFRSSLKSQSNLSLLLVTIFALIFFMQQFSILVLLARPQHVHVNTPIDFMNRMENGASRSASDVAWMEKRIHHLKDEMYMVETRLERMRNEHALLKKQLQDLEQK* 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4608 613 Pfam GRAM domain 61 162 IPR004182 -
Lja3g4608 613 MobiDBLite consensus disorder prediction 475 493 - -
Lja3g4608 613 ProSiteProfiles VASt domain profile. 273 445 IPR031968 -
Lja3g4608 613 PANTHER PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC 19 611 - -
Lja3g4608 613 Gene3D - 57 165 IPR011993 -
Lja3g4608 613 CDD PH-GRAM_GRAMDC 69 162 - -
Lja3g4608 613 MobiDBLite consensus disorder prediction 1 44 - -
Lja3g4608 613 SMART gram2001c 59 125 IPR004182 -
Lja3g4608 613 Coils Coil 579 613 - -
Lja3g4608 613 MobiDBLite consensus disorder prediction 467 493 - -
Lja3g4608 613 MobiDBLite consensus disorder prediction 24 44 - -
Lja3g4608 613 Pfam VAD1 Analog of StAR-related lipid transfer domain 277 425 IPR031968 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4608 - - gmx:100805910 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g4608 3 87967426 87978701 Lja3g4608 3 87967426 87978701 ECH