Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4601 ATGGCTTCAACCTCAACCTCCCTCTCATTCTTCTCATCTTCAATCTTCCTCTCTAACCCTTCAAAACTCAAAGTCCCCACAAAACTCTCTAATTCTAATTCAACCCCCTTCTCCGTCGCCTGCAAGCTCGCAACCCTCCCGGTTCTCTCCTTCACCGGCGAGAAAGTCGGCGAGTCCACCCTCGACCTCAAAACCGCCCCACCAAACACCGCACGTGCCGTCGTCCACCGCGCCGTCGTCACCGACCTCCAAAACAAGCGCCGCGGCACCGCCTCCACCAAGACCCGCGCGGAGGTCCGCGGCGGTGGCAAGAAGCCCTACCCTCAGAAGAAGACCGGTCGCGCCCGGCGAGGGTCAAACCGGACTCCGCTTCGTCCCGGCGGAGGTGTCATCTTCGGCCCGAGGCCGCGTGATTGGAGTATCAAGATTAACCGGAAGGAGAAGAGGCTGGCGATTTCCACCGCTGTGGCTAGTGCTGCTGCGAATACTATCGTGGTGGAGGATTTTGCGGCGGAGTTTGAAGGGAAGCCGAGGACGAAGGATTTCATTGCGGCGTTGAATCGGTGGGGGCTTGACCCGAAGGAGAAGGCTACGTTTGTGGTGACTGAGTTGTCGAAGAATGTGGAGCTTTCGAGTAGGAACATTGGGACTTTGAAGATTTTGACGCCGAGGACGCTGAATTTGTATGATATTTTGAATGCTGATAAGCTTGTGCTCACACCTGGTGCTGTGGAGTTTTTGAATCAGAGGTATGGGGTTAATAACCAAGACAATGATGATGAAGAAGATGAATATGTTGAAGAAGAGGAAGAAGTAGAAGAAGGTGAAGGTGAAGTGGATGGTGAAGAAGGACCTGACACAGAGGATGGTGCTGATGTGGTGAATTAA 888 0.5372 MASTSTSLSFFSSSIFLSNPSKLKVPTKLSNSNSTPFSVACKLATLPVLSFTGEKVGESTLDLKTAPPNTARAVVHRAVVTDLQNKRRGTASTKTRAEVRGGGKKPYPQKKTGRARRGSNRTPLRPGGGVIFGPRPRDWSIKINRKEKRLAISTAVASAAANTIVVEDFAAEFEGKPRTKDFIAALNRWGLDPKEKATFVVTELSKNVELSSRNIGTLKILTPRTLNLYDILNADKLVLTPGAVEFLNQRYGVNNQDNDDEEDEYVEEEEEVEEGEGEVDGEEGPDTEDGADVVN* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4601 295 Coils Coil 258 278 - -
Lja3g4601 295 MobiDBLite consensus disorder prediction 250 295 - -
Lja3g4601 295 Gene3D - 28 269 IPR023574 GO:0003735|GO:0005840|GO:0006412
Lja3g4601 295 SUPERFAMILY Ribosomal protein L4 45 252 IPR023574 GO:0003735|GO:0005840|GO:0006412
Lja3g4601 295 MobiDBLite consensus disorder prediction 85 131 - -
Lja3g4601 295 MobiDBLite consensus disorder prediction 257 295 - -
Lja3g4601 295 PANTHER 39S RIBOSOMAL PROTEIN L4, MITOCHONDRIAL 3 269 - -
Lja3g4601 295 Pfam Ribosomal protein L4/L1 family 71 249 IPR002136 GO:0003735|GO:0005840|GO:0006412
Lja3g4601 295 PANTHER 50S RIBOSOMAL PROTEIN L4 3 269 IPR013005 -
Lja3g4601 295 Hamap 50S ribosomal protein L4 [rplD]. 51 252 IPR013005 -
Lja3g4601 295 TIGRFAM rplD_bact: 50S ribosomal protein uL4 71 247 IPR013005 -
Lja3g4601 295 MobiDBLite consensus disorder prediction 89 105 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4601 K02926 - qsu:112003319 355.91