Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4599 ATGGCGACCGAAGAAGAGAACGCAGAATTCTACCTTCGATACTACGTCGGACACAAGGGGAAGTTCGGCCACGAGTTCTTGGAATTCGAGTTCCGACCCGACGGCAAGCTCCGCTACGCCAACAACTCCAACTACAAAAACGACACCATCATCCGCAAAGAAGTTTACCTAACCCCCGCCGTCCTCCGCGAGTGCCGCCGCATCATCGCCGAGAGCGAGATCATGAAGGAAGATGATAATAACTGGCCGGAGCCTGACCGGGTTGGGAGGCAGGAGCTTGAGATTGTGATGGGGAATGAGCATATCTCGTTTACCACTTCCAAGATTGGGTCTCTGGTGGATGTTCAGAGCAGTGCTGATCCTGAAGGGCTTCGCATTTTCTACTATCTTGTTCAGGATTTGAAGTGCTTTGTCTTCTCTCTTATTTCACTTCACTTCAAGATCAAGCCTATATAA 456 0.5022 MATEEENAEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPAVLRECRRIIAESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSADPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4599 151 Gene3D Mago nashi 7 150 IPR036605 GO:0005634
Lja3g4599 151 Pfam Mago nashi protein 10 151 IPR004023 GO:0008380|GO:0035145
Lja3g4599 151 PANTHER PROTEIN MAGO NASHI HOMOLOG 6 151 IPR004023 GO:0008380|GO:0035145
Lja3g4599 151 CDD Mago_nashi 9 151 IPR004023 GO:0008380|GO:0035145
Lja3g4599 151 SUPERFAMILY Mago nashi protein 9 151 IPR036605 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4599 Lja-Chr3 87851250 87854289 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4599 K12877 - gmx:100305742 305.064