Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4592 ATGGCTGCAACCAGGAGTCGAGTTAGTAGCTTTTCTCGGAATGTGTCAACTGCAACATCTCAGAATCCGGGGCTCAAGCATGGCCCTAACGGGACCACGTTCATCTCATCCGGGATTCCGGATCTTGACAAGATTTTAGGTGGTGGTTTTTCCCTCGGTAGCCTTGTCATGATTATGGAAGATGCTGAGGCACCGCATCATATGCTTCTATTGAGAAATTTTATGTCTCAAGGACTTGTACACAGACAGCCACTCTTGTATGCTAGTGCATCTAGAGACCCTAAAGGATTTCTCGGCACTTTGCCTAGTCCAGGGTCATCCAAAGAGGATAAATCTCGGGATCTTGGCCATGAAAAGGATCTGAGAATTGCTTGGCAGTACAAGAAGTACTTTGGTGAGCCTCAGCTAAATGTCAACTCTAATAATGGTGGTCAGCACGATTACTGCAATGATTTTGACTTGCGAAAGCCCTTGGATAGGCATTTTTTTGGTGGCATGAATGTAGATTGTGTTAGCTTCCAAGATTCTCCAAACCTTGCTACTCTTCAAGATCGTTGTGCTGGATTTCTCGCTCAATGCTCAAGAAATGAAGGCGGCACTTCCCCTGCTGGTCGTATTGCAATTCAATCATTCTGTTCTCCACAGTGTAAATATGCAAACAATGAGTGGCATATTCTTTCCTTTATTAGGTCACTGAGAGGCATGGCCCGTTCTTCAAATGCTGTTGTTGTTGTAACATTTCCACCTTCACTTCTATCTCCATCTTGTTCAAAAAGATTGCAGCATATGGCGGACACCTTGCTATCTGTCAAAGCAATTCCAGATGAAGACAAGGAACTGGCGAAACTCCTAACTGGTTACCAAGACATGGTTGGGTTTTTAAATGTACATAAAGTTGCACGGTTAAATACACAGGTTCCTGTGATTCTTGAGGCCACAACATTCTCAATAAAGTTACAGAGACGAAGGTTTTTGGTTTTAGATTGTCTAAACCAAGCCCCAGTTGACGGTTCAAGCGGGAGTTCGTATGGCACATTGGGTGGCTGTTCTGGGTCAACTAAAGCTGGGTCACTTGATTTTTAG 1083 0.4404 MAATRSRVSSFSRNVSTATSQNPGLKHGPNGTTFISSGIPDLDKILGGGFSLGSLVMIMEDAEAPHHMLLLRNFMSQGLVHRQPLLYASASRDPKGFLGTLPSPGSSKEDKSRDLGHEKDLRIAWQYKKYFGEPQLNVNSNNGGQHDYCNDFDLRKPLDRHFFGGMNVDCVSFQDSPNLATLQDRCAGFLAQCSRNEGGTSPAGRIAIQSFCSPQCKYANNEWHILSFIRSLRGMARSSNAVVVVTFPPSLLSPSCSKRLQHMADTLLSVKAIPDEDKELAKLLTGYQDMVGFLNVHKVARLNTQVPVILEATTFSIKLQRRRFLVLDCLNQAPVDGSSGSSYGTLGGCSGSTKAGSLDF* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4592 360 MobiDBLite consensus disorder prediction 1 32 - -
Lja3g4592 360 Pfam PAXNEB protein 19 360 IPR008728 GO:0002098|GO:0033588
Lja3g4592 360 Gene3D - 17 329 IPR027417 -
Lja3g4592 360 PANTHER PAX6 NEIGHBOR PROTEIN PAXNEB 1 360 IPR008728 GO:0002098|GO:0033588
Lja3g4592 360 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 276 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4592 Lja-Chr3 87756465 87762985 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4592 K11375 - gmx:100799237 631.713