Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4590 ATGGATATGCCACCACAATCAAGTGATGCACACAGAATAACATGGCATAACTGTATCAACTGTCAAAATTACGGTTACGATTTCCTCTTGGGATCAATCGCTGCTTTCTACACGATCATGGTGCCCTACACCAAGGTCGAAGAGAGTTTCAACGTTCAGGCAATGCATGATGTTCTTTATCACCGGTTTAACTTAGACAATTATGATCATCTGGAATTTCCTGGCGTGGTTCCTCGCACTTTCATCGGTGCTTTTCTTGTGTCACTTGTCGCAGCTCCGTTTGCGTTTACCGCAAGTTTGCTTCATTTGCCTAAGTTTTACGCTCTTCTTACAGTTCGGATGGCCCTAGGGTGCATCATACTATATACACTAAGATTCTTCCGTCATCAGATAAGGAGCAAATTTGGGCATCAAGTAGAAGCCTTCTTTGTGATACTAACTTCTGTTCAGTTTCATTTTCTGTTTTATTGTACTCGTCCGCTTCCTAACATTCTTGCTTTGGGTTTAGTGAATTTGGCATATGGATACTGGTTTGAGGGGCGCTTTTATGCAGCTCTAAACTCTCTGATTTTTGCTACAGCTGTGTTCAGATGTGACATGCTATTACTTCTTGGTCCCCTCGGGCTACAACTTCTTCTGACAAAAAAAGTTTCAGTATGGGGTGCTCTAAAACATTGCACTGGCATGGCCTTCTTCTGCACAGGTCTAACCATATTGGTTGATTCAATTATGTGGAAAAGGTTATTGTGGCCTGAATTTGAAGTCTTTTGGTTTAACTCTGTACTGAACAAGAGTTCTGATTGGGGAACACATGCTTTCCATTGGTATTTCACCTCGGCACTTCCTCGTTCATTGCTTGCTGCATACCCTCTTTCCCTGTTTGGCCTCTTTGCAGACAGAAGGGTACGGTCTTTCACTTTCCCTGTTCTTGCCTTCATTTTGCTTTATTCTAAGCTTCCCCACAAGGAGCTTCGTTTTATTATAAGTTCAGTTCCAATATTTAACTTGTCTGCTTCAATTGCATGTAACAGAATTTACAACAATAAGAAAAAGATGATTTGGAATTTGCTTTTCCTTTTCATGTTGGGATTACTTCTTATGAGTCTTGGAGGCACCATCACAACTTTCATGGCATCATACTGGAACTATCCTAGTGGACACGCCTTAAAAAAAATGCATGGTATTGGTCTTCATAATGATACAGATGAAAAATGGGTTCACATTGATACGTTTTCAGCCATGAATGGGATATCTCGCTTTTGTGAAAATGATTTCCCATGGAGGTATTCTAAAGAAGAACAAATTAGCTTGCAAGAATTTCAGCTGAGAAATTTTTCTTTTCTTATAAATGAACATCCTACGGTCAATGGATTCAAATGCATATTCACTGAAGATGGGTTCTCAAGAGTTCGCTATAAGTTTGGCTTTCCGCCAATTTTACTGAAAATAAAAAAAAGAAAGAATATTAAAACGTTTATTTCCTCTTATTTAGCTTTGTAG 1500 0.3933 MDMPPQSSDAHRITWHNCINCQNYGYDFLLGSIAAFYTIMVPYTKVEESFNVQAMHDVLYHRFNLDNYDHLEFPGVVPRTFIGAFLVSLVAAPFAFTASLLHLPKFYALLTVRMALGCIILYTLRFFRHQIRSKFGHQVEAFFVILTSVQFHFLFYCTRPLPNILALGLVNLAYGYWFEGRFYAALNSLIFATAVFRCDMLLLLGPLGLQLLLTKKVSVWGALKHCTGMAFFCTGLTILVDSIMWKRLLWPEFEVFWFNSVLNKSSDWGTHAFHWYFTSALPRSLLAAYPLSLFGLFADRRVRSFTFPVLAFILLYSKLPHKELRFIISSVPIFNLSASIACNRIYNNKKKMIWNLLFLFMLGLLLMSLGGTITTFMASYWNYPSGHALKKMHGIGLHNDTDEKWVHIDTFSAMNGISRFCENDFPWRYSKEEQISLQEFQLRNFSFLINEHPTVNGFKCIFTEDGFSRVRYKFGFPPILLKIKKRKNIKTFISSYLAL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4590 499 Pfam Alg9-like mannosyltransferase family 42 369 IPR005599 GO:0016757
Lja3g4590 499 PANTHER GLYCOSYLTRANSFERASE 40 485 IPR005599 GO:0016757
Lja3g4590 499 PANTHER MANNOSYLTRANSFERASE 40 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4590 Lja-Chr3 87735180 87746248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4590 235 333 Glycosyltransferase AT5G14850 30.303 2.49e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4590 K03847 - gmx:100776070 829.32