Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g4577 ATGGCTGCTTCTGGAATCAATCCAAGGAAAACACAAGAGGTTCTTTCAATTTCAGAGTACCATGAACCTTTGATGGAATTCATGGGTTCACTTCCTCCAGAGGAGAAGGTGATTCTGGTTGGTCACAGTCTTGGAGGGTTATCTGTATCAATTGCTATGGAAAAGTACCCTCAAAAAATCCATGTTGCTGTTTTCATCTCTGCAACCGTTGTCAGTGGAAATCTCACTTATCAGGCTTTTACTCAAGAGGATTTGACGCTTGCTTTATCTTTGGTGAGACCTTTACCTCCATTTACAAGCAATGTTGAATTGTTGTCAAAACAAACAGCAGTTACCAAGAACAAGAATGGAAGGGTACCTAAAGTATTCTTCATCACTGAAAAAGATAATTTGCTAACACAGGATTTCCAGGAGTGGGTAATTGAAAGAACTGGTCCATATGCAGAGGTGAAAGTGATACTGGGTGCAGATCACATGGCCATGCTCTCCAAACCCAAAAAGCTATATAAGCTTCTAAAACGTACCATACATATCATGTAA 540 0.4 MAASGINPRKTQEVLSISEYHEPLMEFMGSLPPEEKVILVGHSLGGLSVSIAMEKYPQKIHVAVFISATVVSGNLTYQAFTQEDLTLALSLVRPLPPFTSNVELLSKQTAVTKNKNGRVPKVFFITEKDNLLTQDFQEWVIERTGPYAEVKVILGADHMAMLSKPKKLYKLLKRTIHIM* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g4577 179 PANTHER METHYLESTERASE FAMILY MEMBER 1 81 IPR045889 -
Lja3g4577 179 PANTHER METHYLESTERASE FAMILY MEMBER 77 173 IPR045889 -
Lja3g4577 179 SUPERFAMILY alpha/beta-Hydrolases 15 174 IPR029058 -
Lja3g4577 179 Pfam Serine aminopeptidase, S33 16 78 IPR022742 -
Lja3g4577 179 PANTHER ALPHA/BETA FOLD HYDROLASE 1 81 - -
Lja3g4577 179 PANTHER ALPHA/BETA FOLD HYDROLASE 77 173 - -
Lja3g4577 179 Gene3D alpha/beta hydrolase 74 177 IPR029058 -
Lja3g4577 179 Gene3D alpha/beta hydrolase 1 73 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g4577 Lja-Chr3 87644470 87645790 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g4577 1 68 Miscellaneous Gene Families AT5G10300 50.000 6.63e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g4577 - - mtr:MTR_8g007670 240.736